RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PLEKHA4Q9H4M7 779 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 ZDHHC7Q9NXF8 308 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 FBXO2Q9UK22 296 aaPredicted RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 FBXW11Q9UKB1 542 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 SORCS3Q9UPU3 1222 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 H0YCG3 227 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 RFPL2O75678 378 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 PIGRP01833 764 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 FGFR3P22607 806 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 OSTNP61366 133 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 MCM6Q14566 821 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 HAUS6Q7Z4H7 955 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 PALB2Q86YC2 1186 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 GLYCTKQ8IVS8 523 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 ACAP3Q96P50 834 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 HAPLN2Q9GZV7 340 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 ANKFY1Q9P2R3 1169 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 CLUHO75153 1309 aa18.62■□□□□ 0.57
LRRC28-210ENST00000558879 B3GAT3O94766 335 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 SCP2P22307 547 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 PDXDC1Q6P996 788 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 DCLRE1AQ6PJP8 1040 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 USP49Q70CQ1 688 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 KREMEN2Q8NCW0 462 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 DDX27Q96GQ7 796 aaKnown RBP18.61■□□□□ 0.57
LRRC28-210ENST00000558879 KCNH6Q9H252 994 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 PARVGQ9HBI0 331 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 WDR6Q9NNW5 1121 aaKnown RBP18.61■□□□□ 0.57
LRRC28-210ENST00000558879 SLC38A7Q9NVC3 462 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 MTRRQ9UBK8 725 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 SRPRBQ9Y5M8 271 aaKnown RBP18.61■□□□□ 0.57
LRRC28-210ENST00000558879 WDFY4Q6ZS81 3184 aa18.61■□□□□ 0.57
LRRC28-210ENST00000558879 K7ENM7 598 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 FAM189A1O60320 539 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 N4BP1O75113 896 aaKnown RBP18.6■□□□□ 0.57
LRRC28-210ENST00000558879 ZMYND10O75800 440 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 SPATA31D3P0C874 917 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 HARSP12081 509 aaKnown RBP18.6■□□□□ 0.57
LRRC28-210ENST00000558879 MTMR3Q13615 1198 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 SLC10A6Q3KNW5 377 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 SPATA31D4Q6ZUB0 917 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 CEP57Q86XR8 500 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 TCHPQ9BT92 498 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 STK17AQ9UEE5 414 aa18.6■□□□□ 0.57
LRRC28-210ENST00000558879 PODXLO00592 558 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 ADAM12O43184 909 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 FAM13AO94988 1023 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 ASGR2P07307 311 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 TKTP29401 623 aaKnown RBP18.59■□□□□ 0.57
LRRC28-210ENST00000558879 MARCKSP29966 332 aaPredicted RBP18.59■□□□□ 0.57
LRRC28-210ENST00000558879 BRCC3P46736 316 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 DHX8Q14562 1220 aaKnown RBP18.59■□□□□ 0.57
LRRC28-210ENST00000558879 SEZ6Q53EL9 994 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 SPECC1Q5M775 1068 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 OTOP3Q7RTS5 596 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 UBALD2Q8IYN6 164 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 RASSF8Q8NHQ8 419 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 SMG7Q92540 1137 aaKnown RBP18.59■□□□□ 0.57
LRRC28-210ENST00000558879 SNX21Q969T3 373 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 ACSF2Q96CM8 615 aaPredicted RBP18.59■□□□□ 0.57
LRRC28-210ENST00000558879 MFSD14AQ96MC6 490 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 PRKD2Q9BZL6 878 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 TBX20Q9UMR3 447 aa18.59■□□□□ 0.57
LRRC28-210ENST00000558879 TTC26A0AVF1 554 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 CLDN3O15551 220 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 STX6O43752 255 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 TRAK2O60296 914 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 CXCL8P10145 99 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 MYBP10242 640 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 HOXA9P31269 272 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 RAB33AQ14088 237 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 MAP4K3Q8IVH8 894 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 MYCT1Q8N699 235 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 C18orf25Q96B23 403 aaPredicted RBP18.58■□□□□ 0.56
LRRC28-210ENST00000558879 FAM122AQ96E09 287 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 SMOC2Q9H3U7 446 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 ST6GALNAC4Q9H4F1 302 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.56
LRRC28-210ENST00000558879 BACE2Q9Y5Z0 518 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 MIA3Q5JRA6 1907 aa18.58■□□□□ 0.56
LRRC28-210ENST00000558879 DENND4CQ5VZ89 1909 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 I3L4J1 428 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 HNRNPDLO14979 420 aaKnown RBP18.57■□□□□ 0.56
LRRC28-210ENST00000558879 TRAPPC3O43617 180 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 DDIT3P35638 169 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 TNFSF9P41273 254 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
LRRC28-210ENST00000558879 GTF2BQ00403 316 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 SLC39A4Q6P5W5 647 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 RSPO2Q6UXX9 243 aaPredicted RBP18.57■□□□□ 0.56
LRRC28-210ENST00000558879 ANKS3Q6ZW76 656 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 FBXL6Q8N531 539 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 STAMQ92783 540 aa18.57■□□□□ 0.56
LRRC28-210ENST00000558879 PBXIP1Q96AQ6 731 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms