RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 MYH11P35749 1972 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 ZDBF2Q9HCK1 2354 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 CLUHO75153 1309 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 PIEZO1Q92508 2521 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 F8W810 466 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 TEX28O15482 410 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 EFEMP2O95967 443 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 C1RP00736 705 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 CTHP32929 405 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 PTPN5P54829 565 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 ELAVL2Q12926 359 aaKnown RBP8.87□□□□□ -0.99
TRAF3-205ENST00000558700 DMP1Q13316 513 aaPredicted RBP8.87□□□□□ -0.99
TRAF3-205ENST00000558700 HSP90AA2PQ14568 343 aaPredicted RBP8.87□□□□□ -0.99
TRAF3-205ENST00000558700 RILPL1Q5EBL4 403 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 KRT79Q5XKE5 535 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 GSTCDQ8NEC7 633 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 ARMC2Q8NEN0 867 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 HDAC7Q8WUI4 952 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 RIN2Q8WYP3 895 aaPredicted RBP8.87□□□□□ -0.99
TRAF3-205ENST00000558700 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 RHOBTB2Q9BYZ6 727 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 PLEKHA4Q9H4M7 779 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 DDX19AQ9NUU7 478 aaKnown RBP8.87□□□□□ -0.99
TRAF3-205ENST00000558700 FNIP2Q9P278 1114 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 PDCD11Q14690 1871 aaKnown RBP8.87□□□□□ -0.99
TRAF3-205ENST00000558700 CITO14578 2027 aa8.87□□□□□ -0.99
TRAF3-205ENST00000558700 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 TRIOO75962 3097 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 CASTOR2A6NHX0 329 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 TADA2AO75478 443 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 KIF4AO95239 1232 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 THP07101 528 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 ASGR2P07307 311 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 PTK2Q05397 1052 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 PDIA5Q14554 519 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 PTPRNQ16849 979 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 LIN9Q5TKA1 542 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 ATF7IP2Q5U623 682 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 KIAA0319Q5VV43 1072 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 EEF1DP3Q658K8 133 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 MCTP1Q6DN14 999 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 KANK3Q6NY19 840 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 PDXDC1Q6P996 788 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 C4orf32Q8N8J7 132 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 PRSS33Q8NF86 280 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 SMG7Q92540 1137 aaKnown RBP8.86□□□□□ -0.99
TRAF3-205ENST00000558700 KIFC3Q9BVG8 833 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 TIPINQ9BVW5 301 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 TOPORSQ9NS56 1045 aaPredicted RBP8.86□□□□□ -0.99
TRAF3-205ENST00000558700 CHST7Q9NS84 486 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 MIOSQ9NXC5 875 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 ZDHHC7Q9NXF8 308 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 SNTG2Q9NY99 539 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 DNM3Q9UQ16 869 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 PCDHB6Q9Y5E3 794 aa8.86□□□□□ -0.99
TRAF3-205ENST00000558700 TRIP11Q15643 1979 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 CCDC195A0A1B0GUA6 201 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 PP2D1A8MPX8 630 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 H3BQV1 296 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 TMEM189-UBE2V1I3L0A0 370 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 PTGESO14684 152 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 LZTS3O60299 673 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 EDN1P05305 212 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 GBP2P32456 591 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 MCM2P49736 904 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 TOB1P50616 345 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 YARSP54577 528 aaKnown RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 VCPP55072 806 aaKnown RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 ATP2C1P98194 919 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 PSMD5Q16401 504 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 ECM1Q16610 540 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 ZNF568Q3ZCX4 644 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 DTHD1Q6ZMT9 781 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 TAS1R1Q7RTX1 841 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 GLYCTKQ8IVS8 523 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 HASPINQ8TF76 798 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 PIK3R5Q8WYR1 880 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 CDK5RAP3Q96JB5 506 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 B3GALT6Q96L58 329 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 UROC1Q96N76 676 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 TTPALQ9BTX7 342 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 CCDC94Q9BW85 323 aaPredicted RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 MRPL4Q9BYD3 311 aaKnown RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 GPR62Q9BZJ7 368 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 NT5C3AQ9H0P0 336 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 C17orf75Q9HAS0 396 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 PIDD1Q9HB75 910 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 WDR6Q9NNW5 1121 aaKnown RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
TRAF3-205ENST00000558700 ZMIZ1Q9ULJ6 1067 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 TNFSF13BQ9Y275 285 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 GDAQ9Y2T3 454 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 GPSM3Q9Y4H4 160 aa8.85□□□□□ -0.99
TRAF3-205ENST00000558700 DOCK8Q8NF50 2099 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms