RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 TBX20Q9UMR3 447 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 PLXNA3P51805 1871 aa16.95■□□□□ 0.3
CSHL1-208ENST00000558609 TECTAO75443 2155 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 C2CD4DB7Z1M9 353 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 MEFVO15553 781 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 TGM5O43548 720 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 TRAK2O60296 914 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 PIGRP01833 764 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 RPL17P18621 184 aaKnown RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 FGFR3P22607 806 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 SP100P23497 879 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 IGFBP6P24592 240 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 ABCD1P33897 745 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 ZXDAP98168 799 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 SOX4Q06945 474 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 SLC10A6Q3KNW5 377 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 PRSS55Q6UWB4 352 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.94■□□□□ 0.3
CSHL1-208ENST00000558609 CEP57Q86XR8 500 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 PALB2Q86YC2 1186 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 FIZ1Q96SL8 496 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 HAPLN2Q9GZV7 340 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 KCNH6Q9H252 994 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 GOLGA2P5Q9HBQ8 144 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 CITO14578 2027 aa16.94■□□□□ 0.3
CSHL1-208ENST00000558609 CCDC195A0A1B0GUA6 201 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 TBCAO75347 108 aaKnown RBP16.93■□□□□ 0.3
CSHL1-208ENST00000558609 SPATA31D3P0C874 917 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 HARSP12081 509 aaKnown RBP16.93■□□□□ 0.3
CSHL1-208ENST00000558609 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
CSHL1-208ENST00000558609 TXLNAP40222 546 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
CSHL1-208ENST00000558609 GTF2BQ00403 316 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 PSMD5Q16401 504 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 PTPN21Q16825 1174 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 RRAGBQ5VZM2 374 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 TRIM67Q6ZTA4 783 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 SPATA31D4Q6ZUB0 917 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 ZDHHC14Q8IZN3 488 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 PLCD3Q8N3E9 789 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 KRI1Q8N9T8 703 aaKnown RBP16.93■□□□□ 0.3
CSHL1-208ENST00000558609 C3orf58Q8NDZ4 430 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 BICD1Q96G01 975 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 PLEKHA5Q9HAU0 1116 aa16.93■□□□□ 0.3
CSHL1-208ENST00000558609 MTCL1Q9Y4B5 1905 aaKnown RBP16.93■□□□□ 0.3
CSHL1-208ENST00000558609 K7ENM7 598 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 CLTAP09496 248 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
CSHL1-208ENST00000558609 MATR3P43243 847 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSHL1-208ENST00000558609 LIG4P49917 911 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 KYAT1Q16773 422 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 SEZ6Q53EL9 994 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 CCDC149Q6ZUS6 474 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 GLYCTKQ8IVS8 523 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 TDRD5Q8NAT2 981 aaKnown RBP16.92■□□□□ 0.3
CSHL1-208ENST00000558609 KREMEN2Q8NCW0 462 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 PHOX2BQ99453 314 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 ST6GALNAC4Q9H4F1 302 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 ZDHHC7Q9NXF8 308 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 VWA8A3KMH1 1905 aa16.92■□□□□ 0.3
CSHL1-208ENST00000558609 DENND4AQ7Z401 1863 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 PODXLO00592 558 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 HNRNPDLO14979 420 aaKnown RBP16.91■□□□□ 0.3
CSHL1-208ENST00000558609 RFPL2O75678 378 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 NMT1P30419 496 aaKnown RBP16.91■□□□□ 0.3
CSHL1-208ENST00000558609 CCDC73Q6ZRK6 1079 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 OTOP3Q7RTS5 596 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 BMP8AQ7Z5Y6 402 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 DDX12PQ92771 950 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 ZNF707Q96C28 371 aaPredicted RBP16.91■□□□□ 0.3
CSHL1-208ENST00000558609 ZNF396Q96N95 335 aaPredicted RBP16.91■□□□□ 0.3
CSHL1-208ENST00000558609 MYO10Q9HD67 2058 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 C2orf16Q68DN1 1984 aa16.91■□□□□ 0.3
CSHL1-208ENST00000558609 A0A0B4J269 797 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 TMEM221A6NGB7 291 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 M0R296 226 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 OGTO15294 1046 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 FAM189A1O60320 539 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 ZMYND10O75800 440 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 CXCL8P10145 99 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 MYBP10242 640 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 BRCC3P46736 316 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 SIGLEC14Q08ET2 396 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 RAB33AQ14088 237 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 STK38Q15208 465 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 DYMQ7RTS9 669 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 ZNF720Q7Z2F6 126 aa16.9■□□□□ 0.3
CSHL1-208ENST00000558609 SMG7Q92540 1137 aaKnown RBP16.9■□□□□ 0.3
CSHL1-208ENST00000558609 C18orf25Q96B23 403 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms