RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TRABDQ9H4I3 376 aa11.92□□□□□ -0.5
PCAT29-201ENST00000558411 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
PCAT29-201ENST00000558411 KIAA1024Q9UPX6 916 aa11.92□□□□□ -0.5
PCAT29-201ENST00000558411 ASTN1O14525 1302 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 MAGEC1O60732 1142 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 GOLGA8HP0CJ92 632 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 USP46P62068 366 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 SGO2Q562F6 1265 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 ARSHQ5FYA8 562 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 MKNK2Q9HBH9 465 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 ARL8BQ9NVJ2 186 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
PCAT29-201ENST00000558411 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
PCAT29-201ENST00000558411 POTECB2RU33 542 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PLSCR1O15162 318 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ITGA2BP08514 1039 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 VAV1P15498 845 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ABCD1P33897 745 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 NEK3P51956 506 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 RPL26P61254 145 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 MAP3K10Q02779 954 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 SULT2A1Q06520 285 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 CHRNA2Q15822 529 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 IZUMO2Q6UXV1 221 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 NET1Q7Z628 596 aaPredicted RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PHLDB2Q86SQ0 1253 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 SPATA24Q86W54 205 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ZNF444Q8N0Y2 327 aaPredicted RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 DTX3LQ8TDB6 740 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ZNF75CPQ92670 426 aaPredicted RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 DDX50Q9BQ39 737 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 MKNK1Q9BUB5 465 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 RIOX1Q9H6W3 641 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 APEX2Q9UBZ4 518 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 GRID1Q9ULK0 1009 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PHLPP1O60346 1717 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PFDN1O60925 122 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 SPAG7O75391 227 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 USP17L8P0C7I0 530 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ANPEPP15144 967 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PSMC2P35998 433 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 RGS2P41220 211 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 FMO5P49326 533 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 INHBCP55103 352 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ADCY1Q08828 1119 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 GRM2Q14416 872 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 MESDQ14696 234 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 R3HDM1Q15032 1099 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 KLC3Q6P597 504 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 CCDC62Q6P9F0 684 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ADGRG6Q86SQ4 1221 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 MYLK4Q86YV6 388 aaPredicted RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 SCYL3Q8IZE3 742 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PIP4K2CQ8TBX8 421 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 MAML3Q96JK9 1138 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PIGSQ96S52 555 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 OSBPL8Q9BZF1 889 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 GPAMQ9HCL2 828 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 NPHS2Q9NP85 383 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 PTTG2Q9NZH5 202 aa11.9□□□□□ -0.5
PCAT29-201ENST00000558411 MTO1Q9Y2Z2 717 aaKnown RBP11.9□□□□□ -0.5
PCAT29-201ENST00000558411 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 EXOC1LA0A1B0GW35 172 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 TYROBPO43914 113 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 MARCH6O60337 910 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 ZBED4O75132 1171 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 ATP6V1G1O75348 118 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 RARBP10826 455 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 RPA3P35244 121 aaPredicted RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 CETN2P41208 172 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 CASP4P49662 377 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 AP2B1P63010 937 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 THOC5Q13769 683 aaKnown RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 PALB2Q86YC2 1186 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 TRIM42Q8IWZ5 723 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 SYT2Q8N9I0 419 aaPredicted RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 WDR66Q8TBY9 1149 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 SKA1Q96BD8 255 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 CATSPER2Q96P56 530 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms