RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 LTBRP36941 435 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 OSTNP61366 133 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 CREMQ03060 361 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 PDXDC1Q6P996 788 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 ADGRD2Q7Z7M1 963 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 TMEM173Q86WV6 379 aaPredicted RBP9.25□□□□□ -0.93
TPM1-213ENST00000558400 SYCP3Q8IZU3 236 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 CASP10Q92851 521 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 PPP1R10Q96QC0 940 aaKnown RBP9.25□□□□□ -0.93
TPM1-213ENST00000558400 MSTO1Q9BUK6 570 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 STRA6Q9BX79 667 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 TRIM9Q9C026 710 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 RPF1Q9H9Y2 349 aaKnown RBP9.25□□□□□ -0.93
TPM1-213ENST00000558400 CHST7Q9NS84 486 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 CNTN3Q9P232 1028 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 CD207Q9UJ71 328 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 STYXL1Q9Y6J8 313 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 SF3B1O75533 1304 aaKnown RBP eCLIP9.25□□□□□ -0.93
TPM1-213ENST00000558400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 HIDE1A8MVS5 230 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 TMEM189-UBE2V1I3L0A0 370 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 B4GALT3O60512 393 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 LILRB3O75022 631 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 PPP1R37O75864 691 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 B3GAT3O94766 335 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 CSPG5O95196 566 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 EFEMP2O95967 443 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 ADRB2P07550 413 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 CYP3A5P20815 502 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 PAX3P23760 479 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 KLRC2P26717 231 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 GLUD2P49448 558 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 ASIC1P78348 528 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 DSG1Q02413 1049 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 PPP2R3AQ06190 1150 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 COASYQ13057 564 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 PSMD2Q13200 908 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 KCNC3Q14003 757 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 NAB2Q15742 525 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 UPP1Q16831 310 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 SLC10A6Q3KNW5 377 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 ZC2HC1CQ53FD0 456 aaPredicted RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 L1TD1Q5T7N2 865 aaKnown RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 KIAA0319Q5VV43 1072 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 PTCRAQ6ISU1 281 aaPredicted RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 KANK3Q6NY19 840 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 FUT10Q6P4F1 479 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 UNC13DQ70J99 1090 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 RNF168Q8IYW5 571 aaPredicted RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 CEP120Q8N960 986 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 HERC2P3Q9BVR0 1158 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 KCNH6Q9H252 994 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 ASB7Q9H672 318 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 RXFP1Q9HBX9 757 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 MARCH5Q9NX47 278 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 FNIP2Q9P278 1114 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 PRKAG3Q9UGI9 489 aa9.24□□□□□ -0.93
TPM1-213ENST00000558400 AGO2Q9UKV8 859 aaKnown RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
TPM1-213ENST00000558400 NLRC5Q86WI3 1866 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 FAM237AA0A1B0GTK4 181 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 A0A1B0GVL5 298 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 TTC26A0AVF1 554 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 CASTOR2A6NHX0 329 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 H3BQ06 376 aaPredicted RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 EIF3DO15371 548 aaKnown RBP eCLIP9.23□□□□□ -0.93
TPM1-213ENST00000558400 CLASP2O75122 1294 aaKnown RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 ADH1AP07327 375 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 GARTP22102 1010 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 GTF2F1P35269 517 aaKnown RBP eCLIP9.23□□□□□ -0.93
TPM1-213ENST00000558400 SYKP43405 635 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 AFMP43652 599 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 ITIH3Q06033 890 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 SMAD4Q13485 552 aaKnown RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 PTPN14Q15678 1187 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 FAM171A1Q5VUB5 890 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 CES5AQ6NT32 575 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 NT5DC4Q86YG4 428 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 HDAC7Q8WUI4 952 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 BCL7CQ8WUZ0 217 aaPredicted RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 POMGNT1Q8WZA1 660 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 STAMQ92783 540 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 CCDC47Q96A33 483 aaKnown RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 MSLNLQ96KJ4 702 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 KLHL5Q96PQ7 755 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 TTPALQ9BTX7 342 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 GPR62Q9BZJ7 368 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 KIAA1586Q9HCI6 787 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 DZANK1Q9NVP4 752 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 TBC1D7Q9P0N9 293 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 CLEC1BQ9P126 229 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 CGNQ9P2M7 1197 aaKnown RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 CPSF3Q9UKF6 684 aaKnown RBP9.23□□□□□ -0.93
TPM1-213ENST00000558400 UBQLN1Q9UMX0 589 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms