RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 POTEMA6NI47 508 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 BIN1O00499 593 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 DKC1O60832 514 aaKnown RBP eCLIP12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 LRRN2O75325 713 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 CASP1P29466 404 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 AXLP30530 894 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 TYRO3Q06418 890 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 PPP4R3AQ6IN85 833 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 FUT10Q6P4F1 479 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 GET4Q7L5D6 327 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 FOXQ1Q9C009 403 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 SIT1Q9Y3P8 196 aa12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 MORC2Q9Y6X9 1032 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-204ENST00000558376 COL4A3Q01955 1670 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 ERLIN2O94905 339 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 C1RP00736 705 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 ARF4P18085 180 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 AKAP5P24588 427 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 AFMP43652 599 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 KARSQ15046 597 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 ELMSAN1Q6PJG2 1045 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 DCLRE1AQ6PJP8 1040 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 DCLK2Q8N568 766 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 ASAP3Q8TDY4 903 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 NXF3Q9H4D5 531 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 TTC12Q9H892 705 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 ARHGEF3Q9NR81 526 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 SLC2A4RGQ9NR83 387 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 FNIP2Q9P278 1114 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 GIT1Q9Y2X7 761 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 NUMBLQ9Y6R0 609 aa12.3□□□□□ -0.44
RABGGTA-204ENST00000558376 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 INO80B-WBP1J3KQ70 363 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 LAD1O00515 517 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 B4GALT5O43286 388 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 ACTN4O43707 911 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 MARCH6O60337 910 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 ZMYND10O75800 440 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 GPC5P78333 572 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 NTHL1P78549 312 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 CYP4A11Q02928 519 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 MBTD1Q05BQ5 628 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 SPIRE1Q08AE8 756 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 USP41Q3LFD5 358 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 PRSS55Q6UWB4 352 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 OTUD6AQ7L8S5 288 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 CDR2LQ86X02 465 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 C1orf210Q8IVY1 113 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 MAML2Q8IZL2 1156 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 LRRC15Q8TF66 581 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 MTRQ99707 1265 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 SLITRK3O94933 977 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 FSHRP23945 695 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 ARL2P36404 184 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 PRPHP41219 470 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 CAPSQ13938 189 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 ANO6Q4KMQ2 910 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 GPR65Q8IYL9 337 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 ZSWIM4Q9H7M6 989 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 VWA8A3KMH1 1905 aa12.29□□□□□ -0.44
RABGGTA-204ENST00000558376 DNAH14Q0VDD8 3507 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 TBX3O15119 743 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 NPTXRO95502 500 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 UBA7P41226 1012 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 STARD6P59095 220 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 POU5F1BQ06416 359 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■□□ 16.1
RABGGTA-204ENST00000558376 E2F4Q16254 413 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 RTP2Q5QGT7 225 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 PARM1Q6UWI2 310 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 DGLUCYQ7Z3D6 616 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 GRASPQ7Z6J2 395 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 SUMF1Q8NBK3 374 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 PJA1Q8NG27 643 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 FGF14Q92915 247 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms