RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 XBP1P17861 261 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CD53P19397 219 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 KCNJ5P48544 419 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 NPEPPSP55786 919 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 NKX6-1P78426 367 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 TAP2Q03519 686 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 GRIN1Q05586 938 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 STK3Q13188 491 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 FHL3Q13643 280 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 DAG1Q14118 895 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 STARD3Q14849 445 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 EIF4HQ15056 248 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 HS1BP3Q53T59 392 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 ATPAF1Q5TC12 328 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CD276Q5ZPR3 534 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 LMBRD2Q68DH5 695 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 KRT40Q6A162 431 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 RPTNQ6XPR3 784 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CATSPERGQ6ZRH7 1159 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 ZSWIM9Q86XI8 627 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 ANKRD35Q8N283 1001 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 IL17RDQ8NFM7 739 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 TSR2Q969E8 191 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 NMD3Q96D46 503 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CCDC34Q96HJ3 373 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 SNX27Q96L92 541 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CD244Q9BZW8 370 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 A1CFQ9NQ94 594 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 KLHL14Q9P2G3 628 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PPP2R3BQ9Y5P8 575 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 A0A1W2PR48 441 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 SAC3D1A6NKF1 404 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 F5H423 210 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 FFAR2O15552 330 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA12O60330 932 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CCNT2O60583 730 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 EIF5BO60841 1220 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 CD19P15391 556 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 EN2P19622 333 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 SLC7A1P30825 629 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 SRSF3P84103 164 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 FOXO1Q12778 655 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 MBLAC2Q68D91 279 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 ESRP1Q6NXG1 681 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 MPZL3Q6UWV2 235 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 LAYNQ6UX15 382 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 NPNTQ6UXI9 565 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 APBB1IPQ7Z5R6 666 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 FITM2Q8N6M3 262 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 LINC00482Q8N8I6 264 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 USP38Q8NB14 1042 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 FOXRED1Q96CU9 486 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 LRGUKQ96M69 825 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 RIPOR3Q96MK2 946 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 ENKD1Q9H0I2 346 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 ZBTB26Q9HCK0 441 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 AURKAIP1Q9NWT8 199 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 AFF4Q9UHB7 1163 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 HDAC9Q9UKV0 1011 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 SHOC2Q9UQ13 582 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 TMX2Q9Y320 296 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA9Q9Y5G4 932 aaKnown RBP1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA8Q9Y5G5 932 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA7Q9Y5G6 932 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA6Q9Y5G7 932 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA3Q9Y5H0 932 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 PCDHGA2Q9Y5H1 932 aa1.6□□□□□ -2.15
CTDSPL2-202ENST00000558373 WIPF3A6NGB9 483 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 F5H0A9 414 aaPredicted RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 ACOT7O00154 380 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 ADCY6O43306 1168 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 PPP1R11O60927 126 aaPredicted RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 HALP42357 657 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 BLOC1S1P78537 153 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 CDK17Q00537 523 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 BNIP3Q12983 259 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 PUM3Q15397 648 aaKnown RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 ELF2Q15723 593 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 CNGA2Q16280 664 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 ADGRF1Q5T601 910 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 TEDDM1Q5T9Z0 273 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 OGFOD2Q6N063 350 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 Q6ZUG5 572 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 SEM1Q6ZVN7 128 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 CMTM4Q8IZR5 234 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 MYRIPQ8NFW9 859 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 USP13Q92995 863 aaPredicted RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 SCAMP4Q969E2 229 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 ZNF566Q969W8 418 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 GCC1Q96CN9 775 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 ARPC5LQ9BPX5 153 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 LGR4Q9BXB1 951 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 VPS11Q9H270 941 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 PDCL3Q9H2J4 239 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 SLC12A5Q9H2X9 1139 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 HELLSQ9NRZ9 838 aa1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 SPATA6Q9NWH7 488 aaPredicted RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 HERC5Q9UII4 1024 aaKnown RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 MAGED2Q9UNF1 606 aaPredicted RBP1.59□□□□□ -2.15
CTDSPL2-202ENST00000558373 TMEM98Q9Y2Y6 226 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms