RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 LINC00271P0C7V0 271 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 ATP1A3P13637 1013 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 PPP1R2P41236 205 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 CLCN3P51790 818 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 RABGGTBP53611 331 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 NPEPPSP55786 919 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 HTRA4P83105 476 aaPredicted RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 GRB10Q13322 594 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 MORC3Q14149 939 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 ADGRE1Q14246 886 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 DSC3Q14574 896 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 POSTNQ15063 836 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 ECM1Q16610 540 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 FAM187BQ17R55 369 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 LACTB2Q53H82 288 aaPredicted RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 XKR9Q5GH70 373 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 LRIG3Q6UXM1 1119 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 FAM228AQ86W67 206 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 IFT20Q8IY31 132 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 SLC35F6Q8N357 371 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 METTL13Q8N6R0 699 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 TEX9Q8N6V9 391 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 ANKS4BQ8N8V4 417 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 SYT2Q8N9I0 419 aaPredicted RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 WHAMMQ8TF30 809 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 NOC3LQ8WTT2 800 aaKnown RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 TMEM40Q8WWA1 233 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 MYLIPQ8WY64 445 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 KIFAP3Q92845 792 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 SAAL1Q96ER3 474 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 CCDC114Q96M63 670 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 FAM161BQ96MY7 647 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 GSDMAQ96QA5 445 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 FAM49AQ9H0Q0 323 aaPredicted RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 NUCKS1Q9H1E3 243 aaKnown RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 NKX2-4Q9H2Z4 354 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 ELAC1Q9H777 363 aaKnown RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 AGO3Q9H9G7 860 aaKnown RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 IFT122Q9HBG6 1241 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 LUC7LQ9NQ29 371 aaKnown RBP8.65□□□□□ -1.02
RTF1-205ENST00000558298 CHST12Q9NRB3 414 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 RMND1Q9NWS8 449 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 ETAA1Q9NY74 926 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 DNM3Q9UQ16 869 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 COL4A3BPQ9Y5P4 624 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 CLIC4Q9Y696 253 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 KIAA1671Q9BY89 1806 aa8.65□□□□□ -1.02
RTF1-205ENST00000558298 A0A1W2PQC6 194 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 LCHNA4D1U4 455 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 ARHGEF35A5YM69 484 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 LRRC10BA6NIK2 292 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 ZBBXA8MT70 800 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 BUB1BO60566 1050 aaPredicted RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 CA3P07451 260 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 CTSHP09668 335 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 POU3F3P20264 500 aaPredicted RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 AXLP30530 894 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 ABCD1P33897 745 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 PBX1P40424 430 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 UBA7P41226 1012 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 PAFAH1B1P43034 410 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 NAMPTP43490 491 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 ZNF131P52739 623 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 SLC12A3P55017 1021 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 NLRP11P59045 1033 aaKnown RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 PTENP60484 403 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 FAM189BP81408 668 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 CDK17Q00537 523 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 TAP1Q03518 808 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 GRIK3Q13003 919 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 PAK2Q13177 524 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 XRCC4Q13426 336 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 TFDP1Q14186 410 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 KARSQ15046 597 aaKnown RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 SPECC1Q5M775 1068 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 CFAP58Q5T655 872 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 FBXW10Q5XX13 1052 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 CNNM4Q6P4Q7 775 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 PADI6Q6TGC4 694 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
RTF1-205ENST00000558298 SPRED2Q7Z698 418 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 TMCO2Q7Z6W1 182 aaPredicted RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 SDCCAG8Q86SQ7 713 aaPredicted RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 CABP7Q86V35 215 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 LRRC71Q8N4P6 559 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 GBP7Q8N8V2 638 aaPredicted RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 PIGOQ8TEQ8 1089 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 LINC01599Q8WXQ3 324 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 TOP1MTQ969P6 601 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 CALML4Q96GE6 196 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 PNMA5Q96PV4 448 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 ALS2CR12Q96Q35 445 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 OSMRQ99650 979 aa8.64□□□□□ -1.03
RTF1-205ENST00000558298 GCOM2Q9BZD3 368 aaPredicted RBP8.64□□□□□ -1.03
RTF1-205ENST00000558298 FTOQ9C0B1 505 aaKnown RBP eCLIP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms