RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PP2D1A8MPX8 630 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 PROB1E7EW31 1015 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 ANHXE9PGG2 379 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 H0YCG3 227 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 EDN1P05305 212 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 GUCY2CP25092 1073 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 CDC25AP30304 524 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 ELF1P32519 619 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 OSTNP61366 133 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 C8orf34Q49A92 452 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 ARL6IP4Q66PJ3 421 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 MPZL3Q6UWV2 235 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 ALKAL1Q6UXT8 129 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 MTSS1LQ765P7 747 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 SPIRE2Q8WWL2 714 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 SHDQ96IW2 340 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 TARS2Q9BW92 718 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 CDT1Q9H211 546 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 CXCL16Q9H2A7 254 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 PTPRHQ9HD43 1115 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 MTRRQ9UBK8 725 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 CDH7Q9ULB5 785 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 CACNA1HO95180 2353 aa14.91□□□□□ -0.02
SNRPA1-204ENST00000558020 NARSO43776 548 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 TOM1L1O75674 476 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 POU2F2P09086 479 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 KCNE1P15382 129 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 NPR3P17342 541 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 SCP2P22307 547 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 IL17AQ16552 155 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 XKR4Q5GH76 650 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 DAW1Q8N136 415 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 SYT2Q8N9I0 419 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 SLC7A14Q8TBB6 771 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 RUSC1Q9BVN2 902 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 LARSQ9P2J5 1176 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 KCNH3Q9ULD8 1083 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 NUB1Q9Y5A7 615 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 CDY1Q9Y6F8 540 aa14.9□□□□□ -0.02
SNRPA1-204ENST00000558020 VWA3AA6NCI4 1184 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 SFI1A8K8P3 1242 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 H7C4K7 107 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 SLC16A4O15374 487 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 CCL16O15467 120 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 CLDN3O15551 220 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 SLC26A4O43511 780 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 PI15O43692 258 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 PLS3P13797 630 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 NBL1P41271 181 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 HTR4Q13639 388 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 HYIQ5T013 277 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 CWF19L1Q69YN2 538 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 PHLDB3Q6NSJ2 640 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 ZPBP2Q6X784 338 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 CCDC105Q8IYK2 499 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 DTWD2Q8NBA8 298 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 ZNF461Q8TAF7 563 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 TMX3Q96JJ7 454 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 AK8Q96MA6 479 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 MMTAG2Q9BU76 263 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 SLC2A4RGQ9NR83 387 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 CA14Q9ULX7 337 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 NUMBLQ9Y6R0 609 aa14.89□□□□□ -0.03
SNRPA1-204ENST00000558020 PODXLO00592 558 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 PRRG1O14668 218 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 SYN3O14994 580 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 ADAM12O43184 909 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 PLA2G4BP0C869 781 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 PROZP22891 400 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 GJB2P29033 226 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 TKTP29401 623 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 UBA7P41226 1012 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 MATR3P43243 847 aaKnown RBP eCLIP14.88□□□□□ -0.031e-7■■□□□ 11.4
SNRPA1-204ENST00000558020 RAD51AP2Q09MP3 1159 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 KYAT1Q16773 422 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 PABPC1LQ4VXU2 614 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 CEP120Q8N960 986 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 GPR152Q8TDT2 470 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 FGF13Q92913 245 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 CALML4Q96GE6 196 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 SNX27Q96L92 541 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 PLEKHA5Q9HAU0 1116 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 GOLGA2P5Q9HBQ8 144 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 SIT1Q9Y3P8 196 aa14.88□□□□□ -0.03
SNRPA1-204ENST00000558020 USP34Q70CQ2 3546 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 KRBA1A5PL33 1030 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 BMP15O95972 392 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 LRG1P02750 347 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 HARSP12081 509 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 PTPN2P17706 415 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 MARCKSP29966 332 aaPredicted RBP14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 ABCD1P33897 745 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 PFKPQ01813 784 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 MAPK7Q13164 816 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 NOLC1Q14978 699 aaKnown RBP eCLIP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms