RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FBXL18Q96ME1 805 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 TSPAN18Q96SJ8 248 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 CDH23Q9H251 3354 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 TRIP11Q15643 1979 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 ZNF233A6NK53 670 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 TULP1O00294 542 aaPredicted RBP27.75■■■□□ 2.03
SMAD6-202ENST00000557916 IL18RAPO95256 599 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 NR3C1P04150 777 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 KRT17Q04695 432 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 ADGRE1Q14246 886 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 CBWD2Q8IUF1 395 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 RDH13Q8NBN7 331 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 RABGGTAQ92696 567 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 TMEM169Q96HH4 297 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 PAAF1Q9BRP4 392 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 COLEC11Q9BWP8 271 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 CACNG4Q9UBN1 327 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 TRANK1O15050 2925 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 EXOC3O60645 756 aa27.74■■■□□ 2.03
SMAD6-202ENST00000557916 SOX4Q06945 474 aaPredicted RBP27.74■■■□□ 2.03
SMAD6-202ENST00000557916 HSP90AA2PQ14568 343 aaPredicted RBP27.74■■■□□ 2.03
SMAD6-202ENST00000557916 SNRNP35Q16560 246 aaKnown RBP27.74■■■□□ 2.03
SMAD6-202ENST00000557916 JADE1Q6IE81 842 aa27.74■■■□□ 2.03
SMAD6-202ENST00000557916 SLC9A9Q8IVB4 645 aa27.74■■■□□ 2.03
SMAD6-202ENST00000557916 TMEM174Q8WUU8 243 aa27.74■■■□□ 2.03
SMAD6-202ENST00000557916 BCL7CQ8WUZ0 217 aaPredicted RBP27.74■■■□□ 2.03
SMAD6-202ENST00000557916 GOLGA2P5Q9HBQ8 144 aa27.74■■■□□ 2.03
SMAD6-202ENST00000557916 DMAC2Q9NW81 257 aa27.74■■■□□ 2.03
SMAD6-202ENST00000557916 IGFBP4P22692 258 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 PPP1R2P41236 205 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 UBE3AQ05086 875 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 ZBTB6Q15916 424 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 CENPPQ6IPU0 288 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 POF1BQ8WVV4 589 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 UROC1Q96N76 676 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 LMAN2LQ9H0V9 348 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 PUF60Q9UHX1 559 aaKnown RBP27.73■■■□□ 2.03
SMAD6-202ENST00000557916 UBQLN1Q9UMX0 589 aaKnown RBP27.73■■■□□ 2.03
SMAD6-202ENST00000557916 DERAQ9Y315 318 aa27.73■■■□□ 2.03
SMAD6-202ENST00000557916 NFICP08651 508 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 CD44P16070 742 aaKnown RBP27.72■■■□□ 2.03
SMAD6-202ENST00000557916 WNT7BP56706 349 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 MYBPC2Q14324 1141 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 TMEM132DQ14C87 1099 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 PTPROQ16827 1216 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 ZCWPW2Q504Y3 356 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 DHTKD1Q96HY7 919 aaPredicted RBP27.72■■■□□ 2.03
SMAD6-202ENST00000557916 MARCH5Q9NX47 278 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 TUBGCP4Q9UGJ1 667 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 LZTS1Q9Y250 596 aa27.72■■■□□ 2.03
SMAD6-202ENST00000557916 COL4A4P53420 1690 aaPredicted RBP27.71■■■□□ 2.03
SMAD6-202ENST00000557916 PPP1R3GB7ZBB8 358 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 F8W810 466 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 PSMA7O14818 248 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 XPOTO43592 962 aaKnown RBP27.71■■■□□ 2.03
SMAD6-202ENST00000557916 CYP3A5P20815 502 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 DNAJB1P25685 340 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 CLCNKBP51801 687 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 NFIL3Q16649 462 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 DDX27Q96GQ7 796 aaKnown RBP27.71■■■□□ 2.03
SMAD6-202ENST00000557916 TSG101Q99816 390 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 PDE11AQ9HCR9 933 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 C2CD2Q9Y426 696 aa27.71■■■□□ 2.03
SMAD6-202ENST00000557916 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.71■■■□□ 2.03
SMAD6-202ENST00000557916 FOSL2P15408 326 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 NR2F2P24468 414 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 RPL13P26373 211 aaKnown RBP27.7■■■□□ 2.03
SMAD6-202ENST00000557916 UPP1Q16831 310 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 EDRF1Q3B7T1 1238 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 DCLRE1AQ6PJP8 1040 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 DDX53Q86TM3 631 aaKnown RBP27.7■■■□□ 2.03
SMAD6-202ENST00000557916 BEST2Q8NFU1 509 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 MRPL38Q96DV4 380 aaKnown RBP27.7■■■□□ 2.03
SMAD6-202ENST00000557916 LMCD1Q9NZU5 365 aa27.7■■■□□ 2.03
SMAD6-202ENST00000557916 CSPG5O95196 566 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 POU3F3P20264 500 aaPredicted RBP27.69■■■□□ 2.02
SMAD6-202ENST00000557916 RPL9P32969 192 aaKnown RBP27.69■■■□□ 2.02
SMAD6-202ENST00000557916 ADAM9Q13443 819 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 CAMK1Q14012 370 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 SURF1Q15526 300 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 SPATA1Q5VX52 437 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 KLHL10Q6JEL2 608 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 NT5DC4Q86YG4 428 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 EFCAB13Q8IY85 973 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 ADAM28Q9UKQ2 775 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 MTCH2Q9Y6C9 303 aa27.69■■■□□ 2.02
SMAD6-202ENST00000557916 PODXLO00592 558 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 TADA2AO75478 443 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 KIF4AO95239 1232 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 PTMSP20962 102 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 CCNE1P24864 410 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 CYP24A1Q07973 514 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 CEP135Q66GS9 1140 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 ANKRD40Q6AI12 368 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 MFSD14AQ96MC6 490 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 TLR9Q9NR96 1032 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 FRMD4BQ9Y2L6 1034 aa27.68■■■□□ 2.02
SMAD6-202ENST00000557916 B3GAT3O94766 335 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 LRPAP1P30533 357 aa27.67■■■□□ 2.02
SMAD6-202ENST00000557916 CASP4P49662 377 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms