RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 SCAND2PQ9GZW5 306 aaPredicted RBP18.27■□□□□ 0.52
NEK9-211ENST00000557673 NXF3Q9H4D5 531 aaKnown RBP18.27■□□□□ 0.52
NEK9-211ENST00000557673 SIT1Q9Y3P8 196 aa18.27■□□□□ 0.52
NEK9-211ENST00000557673 SF3B1O75533 1304 aaKnown RBP eCLIP18.26■□□□□ 0.51
NEK9-211ENST00000557673 ANHXE9PGG2 379 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 E9PMD0 336 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 PLCG1P19174 1290 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 AKAP5P24588 427 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 TXLNAP40222 546 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 GET4Q7L5D6 327 aaPredicted RBP18.26■□□□□ 0.51
NEK9-211ENST00000557673 CDR2LQ86X02 465 aaPredicted RBP18.26■□□□□ 0.51
NEK9-211ENST00000557673 GPR152Q8TDT2 470 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 ARHGEF3Q9NR81 526 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 SLC2A4RGQ9NR83 387 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 PARP2Q9UGN5 583 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 PCDHA7Q9UN72 937 aa18.26■□□□□ 0.51
NEK9-211ENST00000557673 A0A1B0GUA9 196 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 ZMYND10O75800 440 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 FSHRP23945 695 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 CDCA2Q69YH5 1023 aaPredicted RBP18.25■□□□□ 0.51
NEK9-211ENST00000557673 DCLRE1AQ6PJP8 1040 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 SHC4Q6S5L8 630 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 GLYCTKQ8IVS8 523 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 GSTCDQ8NEC7 633 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 RASSF8Q8NHQ8 419 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 B3GALT6Q96L58 329 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 PLIN2Q99541 437 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 DNM3Q9UQ16 869 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 WDR87Q6ZQQ6 2873 aa18.25■□□□□ 0.51
NEK9-211ENST00000557673 EP300Q09472 2414 aaPredicted RBP18.24■□□□□ 0.51
NEK9-211ENST00000557673 F8W810 466 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 NPTXRO95502 500 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 HNRNPA1P09651 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
NEK9-211ENST00000557673 HTR4Q13639 388 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 HSP90AA2PQ14568 343 aaPredicted RBP18.24■□□□□ 0.51
NEK9-211ENST00000557673 LIN9Q5TKA1 542 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 PDXDC1Q6P996 788 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 ZBTB8OSQ8IWT0 167 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 PRIMPOLQ96LW4 560 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 TTPALQ9BTX7 342 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 KIFC3Q9BVG8 833 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 GDPD2Q9HCC8 539 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 BLOC1S4Q9NUP1 217 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 NUMBLQ9Y6R0 609 aa18.24■□□□□ 0.51
NEK9-211ENST00000557673 ZNF292O60281 2723 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 A0A087X0B3 334 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 XYLBO75191 536 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 NAMPTP43490 491 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 ELAVL2Q12926 359 aaKnown RBP18.23■□□□□ 0.51
NEK9-211ENST00000557673 TUSC3Q13454 348 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 RESP18Q5W5W9 173 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 MTSS1LQ765P7 747 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 C1orf210Q8IVY1 113 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 BORCS6Q96GS4 357 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 C2orf40Q9H1Z8 148 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 FZD8Q9H461 694 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 PRMT7Q9NVM4 692 aaPredicted RBP18.23■□□□□ 0.51
NEK9-211ENST00000557673 KLK14Q9P0G3 267 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 STK17AQ9UEE5 414 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 CCDC39Q9UFE4 941 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 CDH7Q9ULB5 785 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 USP20Q9Y2K6 914 aa18.23■□□□□ 0.51
NEK9-211ENST00000557673 EDN1P05305 212 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 DCNP07585 359 aaKnown RBP18.22■□□□□ 0.51
NEK9-211ENST00000557673 RPL17P18621 184 aaKnown RBP18.22■□□□□ 0.51
NEK9-211ENST00000557673 LIG1P18858 919 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 HOXA9P31269 272 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 SLC12A3P55017 1021 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 PPM1LQ5SGD2 360 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 DEPTORQ8TB45 409 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 RAD54LQ92698 747 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 RUSC1Q9BVN2 902 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 CCDC113Q9H0I3 377 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 FBXW11Q9UKB1 542 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 R4GN57 208 aa18.22■□□□□ 0.51
NEK9-211ENST00000557673 TDRD15B5MCY1 1934 aaKnown RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 PRKCBP05771 671 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 THP07101 528 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 PLA2G4BP0C869 781 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 STARD6P59095 220 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 MAPK6Q16659 721 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 FAM187BQ17R55 369 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 TMEM132AQ24JP5 1023 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 RTP2Q5QGT7 225 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 FAM171A1Q5VUB5 890 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 PRSS55Q6UWB4 352 aaPredicted RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 CCDC73Q6ZRK6 1079 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 GRASPQ7Z6J2 395 aaPredicted RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 CEP57Q86XR8 500 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 SYT2Q8N9I0 419 aaPredicted RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 PJA1Q8NG27 643 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 LARP4BQ92615 738 aaKnown RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 KIFAP3Q92845 792 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms