RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 MYLIPQ8WY64 445 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 RABGGTAQ92696 567 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 C18orf25Q96B23 403 aaPredicted RBP16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 FBXL18Q96ME1 805 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 CDX2Q99626 313 aaPredicted RBP16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 ALG13Q9NP73 1137 aaKnown RBP16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 RBAKQ9NYW8 714 aaPredicted RBP16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 SPG21Q9NZD8 308 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 TUBGCP4Q9UGJ1 667 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 CALUO43852 315 aaPredicted RBP16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 SLC9A9Q8IVB4 645 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 CD302Q8IX05 232 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 EFCAB13Q8IY85 973 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 IGSF21Q96ID5 467 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 ASB7Q9H672 318 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 KIAA1586Q9HCI6 787 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 SLC38A7Q9NVC3 462 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 FAN1Q9Y2M0 1017 aa16.13■□□□□ 0.17
VIPAS39-210ENST00000557466 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 VWA8A3KMH1 1905 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 CHD9Q3L8U1 2897 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 CARNS1A5YM72 827 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 TRIM49BA6NDI0 452 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 ZNF233A6NK53 670 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 PPP1R3GB7ZBB8 358 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 EXOC3O60645 756 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 CSPG5O95196 566 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 IL18RAPO95256 599 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 ALDH2P05091 517 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 DNAJB1P25685 340 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 GUCY2FP51841 1108 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 PMS1P54277 932 aaKnown RBP16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 TMEM132DQ14C87 1099 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 ZBTB6Q15916 424 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 SNRNP35Q16560 246 aaKnown RBP16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 NFIL3Q16649 462 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 RDH13Q8NBN7 331 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 SPPL3Q8TCT6 385 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 POF1BQ8WVV4 589 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 TMEM169Q96HH4 297 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 GAS2L1Q99501 681 aaPredicted RBP16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 VN1R3Q9BXE9 311 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 PDE11AQ9HCR9 933 aa16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 UBQLN1Q9UMX0 589 aaKnown RBP16.12■□□□□ 0.17
VIPAS39-210ENST00000557466 TSC2P49815 1807 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 PSMA7O14818 248 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 KIF4AO95239 1232 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 NR2F2P24468 414 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 IGFBP6P24592 240 aaPredicted RBP16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 PPP1R2P41236 205 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 CASP4P49662 377 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 CLCNKBP51801 687 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 STIM1Q13586 685 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 CAMK1Q14012 370 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 MYBPC2Q14324 1141 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 EDRF1Q3B7T1 1238 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 CENPPQ6IPU0 288 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 KLHL10Q6JEL2 608 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 RBM43Q6ZSC3 357 aaKnown RBP16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 HASPINQ8TF76 798 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 FAM84AQ96KN4 292 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 UROC1Q96N76 676 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 TSPAN18Q96SJ8 248 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 COLEC11Q9BWP8 271 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 LMAN2LQ9H0V9 348 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 DERAQ9Y315 318 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 C2CD2Q9Y426 696 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 PTPRJQ12913 1337 aa16.11■□□□□ 0.17
VIPAS39-210ENST00000557466 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 XPOTO43592 962 aaKnown RBP16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 CYP3A5P20815 502 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 CCNE1P24864 410 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 UBE3AQ05086 875 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 CYP24A1Q07973 514 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 UPP1Q16831 310 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 CEP135Q66GS9 1140 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 ANKRD40Q6AI12 368 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 C3orf58Q8NDZ4 430 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 DHTKD1Q96HY7 919 aaPredicted RBP16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 TSG101Q99816 390 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 LZTS1Q9Y250 596 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 SCN1AP35498 2009 aa16.1■□□□□ 0.17
VIPAS39-210ENST00000557466 TMEM189-UBE2V1I3L0A0 370 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 PODXLO00592 558 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 EFEMP2O95967 443 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 FOSL2P15408 326 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 IGFBP4P22692 258 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 LRPAP1P30533 357 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 IRS1P35568 1242 aa16.09■□□□□ 0.17
VIPAS39-210ENST00000557466 KRT17Q04695 432 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms