RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 KCNK18Q7Z418 384 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 GRASPQ7Z6J2 395 aaPredicted RBP17.43■□□□□ 0.38
TUBB3-213ENST00000557262 CEP120Q8N960 986 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
TUBB3-213ENST00000557262 TCHPQ9BT92 498 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
TUBB3-213ENST00000557262 PROB1E7EW31 1015 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 STK25O00506 426 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 GFRA3O60609 400 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 XYLBO75191 536 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-213ENST00000557262 MCF2P10911 925 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 OSTNP61366 133 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 ATP2C1P98194 919 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-213ENST00000557262 ZRSR1Q15695 479 aaKnown RBP17.42■□□□□ 0.38
TUBB3-213ENST00000557262 HYIQ5T013 277 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 AXDND1Q5T1B0 1012 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-213ENST00000557262 ANKS3Q6ZW76 656 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 RTL10Q7L3V2 364 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 ACAP3Q96P50 834 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 GOLGA2P5Q9HBQ8 144 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 SLC38A7Q9NVC3 462 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 MTRRQ9UBK8 725 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 BACE2Q9Y5Z0 518 aa17.42■□□□□ 0.38
TUBB3-213ENST00000557262 KRBA1A5PL33 1030 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 SLC16A4O15374 487 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 CCL16O15467 120 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 PROZP22891 400 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 TKTP29401 623 aaKnown RBP17.41■□□□□ 0.38
TUBB3-213ENST00000557262 BRCC3P46736 316 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 SMTNP53814 917 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 SOX4Q06945 474 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-213ENST00000557262 HTR4Q13639 388 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 MPZL3Q6UWV2 235 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 SYT2Q8N9I0 419 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-213ENST00000557262 SPIRE2Q8WWL2 714 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 CDH7Q9ULB5 785 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 POLIQ9UNA4 740 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 CDY1Q9Y6F8 540 aa17.41■□□□□ 0.38
TUBB3-213ENST00000557262 H3BQV1 296 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 I3L4J1 428 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 ABLIM1O14639 778 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 POU2F2P09086 479 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 PLS3P13797 630 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 KCNE1P15382 129 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 RPL9P32969 192 aaKnown RBP17.4■□□□□ 0.38
TUBB3-213ENST00000557262 NBL1P41271 181 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 NTHL1P78549 312 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 STRN3Q13033 797 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
TUBB3-213ENST00000557262 RSPO2Q6UXX9 243 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-213ENST00000557262 CCDC105Q8IYK2 499 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 DTWD2Q8NBA8 298 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 C3orf58Q8NDZ4 430 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 SLC7A14Q8TBB6 771 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 GPR152Q8TDT2 470 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 ZBTB45Q96K62 511 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-213ENST00000557262 ZMAT2Q96NC0 199 aaKnown RBP17.4■□□□□ 0.38
TUBB3-213ENST00000557262 PNMA5Q96PV4 448 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 SLC2A4RGQ9NR83 387 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 CA14Q9ULX7 337 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 NUMBLQ9Y6R0 609 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 DOCK8Q8NF50 2099 aa17.4■□□□□ 0.38
TUBB3-213ENST00000557262 VWA3AA6NCI4 1184 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 PODXLO00592 558 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 TOM1L1O75674 476 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 GJB2P29033 226 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 RAD51AP2Q09MP3 1159 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 ZNF461Q8TAF7 563 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 FGF13Q92913 245 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 SNX27Q96L92 541 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 PLIN2Q99541 437 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 RPP25Q9BUL9 199 aaKnown RBP17.39■□□□□ 0.37
TUBB3-213ENST00000557262 KCND2Q9NZV8 630 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 CNTN3Q9P232 1028 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 DNMT3BQ9UBC3 853 aaKnown RBP17.39■□□□□ 0.37
TUBB3-213ENST00000557262 ZFHX2Q9C0A1 2572 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-213ENST00000557262 CFAP54Q96N23 3096 aa17.39■□□□□ 0.37
TUBB3-213ENST00000557262 VPS13AQ96RL7 3174 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 RFX1P22670 979 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 SLC12A3P55017 1021 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 PHLDB3Q6NSJ2 640 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 PARM1Q6UWI2 310 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 TMEM161BQ8NDZ6 487 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 ST13P5Q8NFI4 369 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-213ENST00000557262 ITFG1Q8TB96 612 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 FGF14Q92915 247 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 MYO15AQ9UKN7 3530 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 TRIP11Q15643 1979 aa17.38■□□□□ 0.37
TUBB3-213ENST00000557262 VWA8A3KMH1 1905 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 H7C4K7 107 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 SYN3O14994 580 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 ABLIM3O94929 683 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 PLA2G4BP0C869 781 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 MAPTP10636 758 aaKnown RBP17.37■□□□□ 0.37
TUBB3-213ENST00000557262 HARSP12081 509 aaKnown RBP17.37■□□□□ 0.37
TUBB3-213ENST00000557262 ELF1P32519 619 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms