RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 BAG3O95817 575 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ZBED1O96006 694 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CHGBP05060 677 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 PAMP19021 973 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 VCAM1P19320 739 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CYP7A1P22680 504 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 AKAP5P24588 427 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 NUCB2P80303 420 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 KIF23Q02241 960 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ALDH6A1Q02252 535 aaKnown RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MECOMQ03112 1051 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 KIAA2012Q0VF49 1180 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CLEC16AQ2KHT3 1053 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ADCK5Q3MIX3 580 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 SBK1Q52WX2 424 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CCDC93Q567U6 631 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 WDR78Q5VTH9 848 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ANKRD34AQ69YU3 496 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CLEC17AQ6ZS10 378 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 SYDE1Q6ZW31 735 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 DZIP1Q86YF9 867 aaKnown RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 TEX2Q8IWB9 1127 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MB21D2Q8IYB1 491 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 TTLL6Q8N841 843 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 NCOA7Q8NI08 942 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ZNF384Q8TF68 577 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 SGCZQ96LD1 299 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 SENP7Q9BQF6 1050 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 HERPUD2Q9BSE4 406 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CRB3Q9BUF7 120 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 PLVAPQ9BX97 442 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 CRNKL1Q9BZJ0 848 aaKnown RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 NAPBQ9H115 298 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 DUSP15Q9H1R2 295 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 AS3MTQ9HBK9 375 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 EPB41L4AQ9HCS5 686 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 RAI14Q9P0K7 980 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 BCCIPQ9P287 314 aaKnown RBP eCLIP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ARPP21Q9UBL0 812 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ABCF2Q9UG63 623 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-215ENST00000557261 U3KQE9 123 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MROH7-TTC4A0A0A0MT08 1334 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 MYO3BQ8WXR4 1341 aa6.89□□□□□ -1.31
FOXN3-215ENST00000557261 PCNTO95613 3336 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 ADAMTSL1Q8N6G6 1762 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 GPR75-ASB3A0A0A6YYF3 556 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 C7orf72A4D263 438 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 FGF10O15520 208 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 SLC26A4O43511 780 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 GAS2O43903 313 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 PPP1R11O60927 126 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 NDUFS2O75306 463 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 HSP90AA1P07900 732 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 TYRP1P17643 537 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 FPR2P25090 351 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 PRDX5P30044 214 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 MCM5P33992 734 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 NOP2P46087 812 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 MTNR1BP49286 362 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 GTF2A2P52657 109 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 RAC1P63000 192 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 TRDNQ13061 729 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 LSAMPQ13449 338 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 SIM2Q14190 667 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 RAB3GAP1Q15042 981 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 KIAA0753Q2KHM9 967 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 MFSD14BQ5SR56 506 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 SFRP5Q5T4F7 317 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 EEF1DP3Q658K8 133 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 SWSAP1Q6NVH7 229 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 CCDC174Q6PII3 467 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 STOX1Q6ZVD7 989 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 ADGRA1Q86SQ6 560 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 RBM12BQ8IXT5 1001 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 SHISA5Q8N114 240 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 LCORLQ8N3X6 602 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 DAGLBQ8NCG7 672 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 ATXN2LQ8WWM7 1075 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 RIN2Q8WYP3 895 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 ZNF622Q969S3 477 aaKnown RBP eCLIP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 PTCHD1Q96NR3 888 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 LLPHQ9BRT6 129 aaKnown RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 LRFN3Q9BTN0 628 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 CD244Q9BZW8 370 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 KRT23Q9C075 422 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 ZNF277Q9NRM2 450 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-215ENST00000557261 KCNH3Q9ULD8 1083 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 GPR45Q9Y5Y3 372 aa6.88□□□□□ -1.31
FOXN3-215ENST00000557261 WTIPA6NIX2 430 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-215ENST00000557261 GSTA4O15217 222 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms