RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SOX4Q06945 474 aaPredicted RBP24.92■■□□□ 1.58
TDP1-216ENST00000556867 EHHADHQ08426 723 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 ZBTB41Q5SVQ8 909 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 TMEM184AQ6ZMB5 413 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 TAS1R1Q7RTX1 841 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 FSIP1Q8NA03 581 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.92■■□□□ 1.58
TDP1-216ENST00000556867 GPR62Q9BZJ7 368 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 IKZF4Q9H2S9 585 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 MRPL17Q9NRX2 175 aaKnown RBP24.92■■□□□ 1.58
TDP1-216ENST00000556867 CLEC1BQ9P126 229 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 SSX2IPQ9Y2D8 614 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 CUL9Q8IWT3 2517 aa24.92■■□□□ 1.58
TDP1-216ENST00000556867 PVALEFA0A1B0GWK0 134 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 CLASP2O75122 1294 aaKnown RBP24.91■■□□□ 1.58
TDP1-216ENST00000556867 ADRB2P07550 413 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 DSG1Q02413 1049 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 CUL4BQ13620 913 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 POSTNQ15063 836 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 ENOX2Q16206 610 aaKnown RBP24.91■■□□□ 1.58
TDP1-216ENST00000556867 UPP1Q16831 310 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 PUS10Q3MIT2 529 aaKnown RBP24.91■■□□□ 1.58
TDP1-216ENST00000556867 FAM26FQ5R3K3 315 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 GPR65Q8IYL9 337 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 GRAMD1CQ8IYS0 662 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 HPS3Q969F9 1004 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 PAGE5Q96GU1 130 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 MSLNLQ96KJ4 702 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 TMEM206Q9H813 350 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 RPF1Q9H9Y2 349 aaKnown RBP24.91■■□□□ 1.58
TDP1-216ENST00000556867 GOLGA2P5Q9HBQ8 144 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 CHST7Q9NS84 486 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 CPSF3Q9UKF6 684 aaKnown RBP24.91■■□□□ 1.58
TDP1-216ENST00000556867 ANK1P16157 1881 aa24.91■■□□□ 1.58
TDP1-216ENST00000556867 EIF3DO15371 548 aaKnown RBP eCLIP24.9■■□□□ 1.58
TDP1-216ENST00000556867 PRPF6O94906 941 aaKnown RBP24.9■■□□□ 1.58
TDP1-216ENST00000556867 SRGAP2BP0DMP2 458 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 ADSSP30520 456 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 CLCNKBP51801 687 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 RBM10P98175 930 aaKnown RBP24.9■■□□□ 1.58
TDP1-216ENST00000556867 PPP2R3AQ06190 1150 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 USP41Q3LFD5 358 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 KIAA0319Q5VV43 1072 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 DCLRE1AQ6PJP8 1040 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 GLIS3Q8NEA6 775 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 HASPINQ8TF76 798 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 POMGNT1Q8WZA1 660 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 DDX27Q96GQ7 796 aaKnown RBP24.9■■□□□ 1.58
TDP1-216ENST00000556867 GOLPH3LQ9H4A5 285 aa24.9■■□□□ 1.58
TDP1-216ENST00000556867 AGO2Q9UKV8 859 aaKnown RBP24.9■■□□□ 1.58
TDP1-216ENST00000556867 BARX2Q9UMQ3 279 aaPredicted RBP24.9■■□□□ 1.58
TDP1-216ENST00000556867 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.9■■□□□ 1.58
TDP1-216ENST00000556867 VWA8A3KMH1 1905 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 MYL1P05976 194 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 ANP32AP39687 249 aaKnown RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 POU5F1Q01860 360 aaKnown RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 ELAVL2Q12926 359 aaKnown RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 PTCRAQ6ISU1 281 aaPredicted RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 EPM2AIP1Q7L775 607 aaPredicted RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 SYCP3Q8IZU3 236 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 TMEM87AQ8NBN3 555 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 C18orf25Q96B23 403 aaPredicted RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 TSPAN18Q96SJ8 248 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 COL25A1Q9BXS0 654 aaPredicted RBP24.89■■□□□ 1.58
TDP1-216ENST00000556867 EMILIN2Q9BXX0 1053 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 CD207Q9UJ71 328 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 HCFC2Q9Y5Z7 792 aa24.89■■□□□ 1.58
TDP1-216ENST00000556867 LACTBL1A8MY62 500 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 B3GAT3O94766 335 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 CNPP09543 421 aaKnown RBP24.88■■□□□ 1.57
TDP1-216ENST00000556867 GARTP22102 1010 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 RPL9P32969 192 aaKnown RBP24.88■■□□□ 1.57
TDP1-216ENST00000556867 KIAA1841Q6NSI8 718 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 CD300LGQ6UXG3 332 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 CD302Q8IX05 232 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 ADAMTS19Q8TE59 1207 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 CASP10Q92851 521 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 KLHL5Q96PQ7 755 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 RXFP1Q9HBX9 757 aa24.88■■□□□ 1.57
TDP1-216ENST00000556867 UBE4BO95155 1302 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 GRXCR2A6NFK2 248 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 PODXLO00592 558 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 C2CD2LO14523 706 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 KLRC4O43908 158 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 ACOT2P49753 483 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 SMAD4Q13485 552 aaKnown RBP24.87■■□□□ 1.57
TDP1-216ENST00000556867 ZBTB6Q15916 424 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 LLGL2Q6P1M3 1020 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 PPFIBP1Q86W92 1011 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 SMRP1Q8NCR6 262 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 C3orf58Q8NDZ4 430 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 ZNF507Q8TCN5 953 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 SLC22A17Q8WUG5 538 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 KIF12Q96FN5 646 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 B3GALT6Q96L58 329 aa24.87■■□□□ 1.57
TDP1-216ENST00000556867 HOXD13P35453 343 aa24.86■■□□□ 1.57
TDP1-216ENST00000556867 CLUL1Q15846 466 aa24.86■■□□□ 1.57
TDP1-216ENST00000556867 TPRNQ4KMQ1 711 aa24.86■■□□□ 1.57
TDP1-216ENST00000556867 ANKRD54Q6NXT1 300 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms