RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 PLPP4Q5VZY2 271 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 DCLRE1AQ6PJP8 1040 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 EPM2AIP1Q7L775 607 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 FMR1NBQ8N0W7 255 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 EFHBQ8N7U6 833 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 MRPL43Q8N983 215 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 TMEM87AQ8NBN3 555 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 ZNF507Q8TCN5 953 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 BCL7CQ8WUZ0 217 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 TLE6Q9H808 572 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 UBE2ZQ9H832 354 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 MARCH5Q9NX47 278 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 CGNQ9P2M7 1197 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 CPSF3Q9UKF6 684 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 ADAM28Q9UKQ2 775 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 DERAQ9Y315 318 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 TRANK1O15050 2925 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 PDCD11Q14690 1871 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 CASTOR2A6NHX0 329 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 TRAPPC3O43617 180 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 KLRC4O43908 158 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 PRPF6O94906 941 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 KIF20AO95235 890 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 IL18RAPO95256 599 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 EFEMP2O95967 443 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 URODP06132 367 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 CYP3A5P20815 502 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 ADSSP30520 456 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 MRPS5P82675 430 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 KCNA1Q09470 495 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 HYAL1Q12794 435 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 ENOX2Q16206 610 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 DUSP6Q16828 381 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 CTC1Q2NKJ3 1217 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 HS2ST1Q7LGA3 356 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 NT5DC4Q86YG4 428 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 GRAMD1CQ8IYS0 662 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 TIGD1Q96MW7 591 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 EMILIN2Q9BXX0 1053 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 FGFBP2Q9BYJ0 223 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 GTPBP4Q9BZE4 634 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 ASB7Q9H672 318 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 KIAA1586Q9HCI6 787 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 MRPL17Q9NRX2 175 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 UBQLN1Q9UMX0 589 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 BRWD1Q9NSI6 2320 aa11.49□□□□□ -0.57
MTHFD1-214ENST00000556771 C2orf71A6NGG8 1288 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 EXTL3O43909 919 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 B3GAT3O94766 335 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 CSPG5O95196 566 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 CXCL14O95715 111 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 C1RP00736 705 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 PAX3P23760 479 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 CASP1P29466 404 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 TNFSF9P41273 254 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 NRIP1P48552 1158 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 GLUD2P49448 558 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 DPYDQ12882 1025 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 KCNB1Q14721 858 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 UPP1Q16831 310 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 USP41Q3LFD5 358 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 PUS10Q3MIT2 529 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 SEZ6Q53EL9 994 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 KIAA1841Q6NSI8 718 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 PPFIBP1Q86W92 1011 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 ENGASEQ8NFI3 743 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 SCFD1Q8WVM8 642 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 ZMAT2Q96NC0 199 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 IPO9Q96P70 1041 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 VN1R3Q9BXE9 311 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 SLC39A2Q9NP94 309 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 CLDND1Q9NY35 253 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 C2CD2Q9Y426 696 aa11.48□□□□□ -0.57
MTHFD1-214ENST00000556771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-214ENST00000556771 LACTBL1A8MY62 500 aa11.47□□□□□ -0.57
MTHFD1-214ENST00000556771 TISP43B9A030 160 aa11.47□□□□□ -0.57
MTHFD1-214ENST00000556771 PODXLO00592 558 aa11.47□□□□□ -0.57
MTHFD1-214ENST00000556771 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-214ENST00000556771 KINO60870 393 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-214ENST00000556771 KIF4AO95239 1232 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms