RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 FOXN1O15353 648 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 OPA1O60313 960 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MARCH6O60337 910 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 ENTPD3O75355 529 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 LEFTY1O75610 366 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CFPP27918 469 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 GBP2P32456 591 aaPredicted RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CYP2C19P33261 490 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MTIF2P46199 727 aaKnown RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 LBX1P52954 281 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 NAPAP54920 295 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MUM1L1Q5H9M0 696 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 SPECC1Q5M775 1068 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 TMEM201Q5SNT2 666 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CCDC122Q5T0U0 273 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 GPATCH4Q5T3I0 446 aaKnown RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 GBP6Q6ZN66 633 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 HS2ST1Q7LGA3 356 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CABP7Q86V35 215 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 RASAL3Q86YV0 1011 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MCATQ8IVS2 390 aaKnown RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 ZFPM1Q8IX07 1006 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 TEX11Q8IYF3 940 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 SRBD1Q8N5C6 995 aaKnown RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 TMEM40Q8WWA1 233 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 P2RX5Q93086 422 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CLMNQ96JQ2 1002 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 ERGIC2Q96RQ1 377 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 TUBGCP2Q9BSJ2 902 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 CRACR2AQ9BSW2 395 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 IDI2Q9BXS1 227 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 ZNF341Q9BYN7 854 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 FOXQ1Q9C009 403 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 DEF6Q9H4E7 631 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MBNL3Q9NUK0 354 aaKnown RBP6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MYH6P13533 1939 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MYH2Q9UKX2 1941 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 MAST2Q6P0Q8 1798 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 GAKO14976 1311 aa6.71□□□□□ -1.34
CPSF2-205ENST00000556622 TMEM232C9JQI7 657 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 KLRF2D3W0D1 207 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 CA12O43570 354 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 EOMESO95936 686 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 CST3P01034 146 aaPredicted RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 GYPCP04921 128 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 CCDC172P0C7W6 258 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 HNRNPH3P31942 346 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 GRK4P32298 578 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 TM4SF4P48230 202 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 CDR1P51861 262 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 OXCT1P55809 520 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 INHBEP58166 350 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 MPP2Q14168 576 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 NKG7Q16617 165 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 MEA1Q16626 185 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 LONRF2Q1L5Z9 754 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 PAPD7Q5XG87 772 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 PPP4R3AQ6IN85 833 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 FBXL19Q6PCT2 694 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 TOGARAM2Q6ZUX3 1019 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 ARMCX6Q7L4S7 300 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 HEATR3Q7Z4Q2 680 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 VPS36Q86VN1 386 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 SPATS2Q86XZ4 545 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 SLFN12Q8IYM2 578 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 REXO1Q8N1G1 1221 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 GUF1Q8N442 669 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 ERMNQ8TAM6 284 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 CAGE1Q8TC20 777 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 ZNF384Q8TF68 577 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 LMBR1Q8WVP7 490 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 SECISBP2LQ93073 1101 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 CCDC17Q96LX7 622 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 HEXIM2Q96MH2 286 aaKnown RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 RUFY1Q96T51 708 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 VPS16Q9H269 839 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 RNF186Q9NXI6 227 aa6.7□□□□□ -1.34
CPSF2-205ENST00000556622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 COL1A1P02452 1464 aaPredicted RBP6.7□□□□□ -1.34
CPSF2-205ENST00000556622 ECM29Q5VYK3 1845 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 PRAMEF27A3QJZ7 478 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 SMCO2A6NFE2 343 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 MANSC4A6NHS7 340 aaPredicted RBP6.69□□□□□ -1.34
CPSF2-205ENST00000556622 MAP2K7O14733 419 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 CCNT1O60563 726 aaKnown RBP6.69□□□□□ -1.34
CPSF2-205ENST00000556622 SLITRK5O94991 958 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 PLEKHA8P1O95397 391 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 HLA-DOAP06340 250 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 EIF4A3P38919 411 aaKnown RBP6.69□□□□□ -1.34
CPSF2-205ENST00000556622 CD96P40200 585 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 CCT6AP40227 531 aaKnown RBP6.69□□□□□ -1.34
CPSF2-205ENST00000556622 PRCPP42785 496 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 ADCY7P51828 1080 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 STX17P56962 302 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 RHBDL3P58872 404 aa6.69□□□□□ -1.34
CPSF2-205ENST00000556622 DYNLL1P63167 89 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms