RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 RC3H2Q9HBD1 1191 aaKnown RBP18.89■□□□□ 0.61
TUBB3-211ENST00000556536 PRDM6Q9NQX0 595 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 CDH23Q9H251 3354 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 GRXCR1A8MXD5 290 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 HOXA2O43364 376 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 NFICP08651 508 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 KCNE1P15382 129 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 PAN2Q504Q3 1202 aaKnown RBP18.88■□□□□ 0.61
TUBB3-211ENST00000556536 C1orf220Q5T0J3 134 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 LMBRD2Q68DH5 695 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-211ENST00000556536 JADE1Q6IE81 842 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 FRMD5Q7Z6J6 570 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 EFCAB13Q8IY85 973 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 ABI1Q8IZP0 508 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 PARD3BQ8TEW8 1205 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 ZNF689Q96CS4 500 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-211ENST00000556536 KIF12Q96FN5 646 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 RPS6KC1Q96S38 1066 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 ANP32EQ9BTT0 268 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 ASB7Q9H672 318 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 ARMCX3Q9UH62 379 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-211ENST00000556536 PTPRJQ12913 1337 aa18.88■□□□□ 0.61
TUBB3-211ENST00000556536 LRRIQ3A6PVS8 624 aaPredicted RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 SMTNL1A8MU46 457 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 BECN2A8MW95 431 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 GNA14O95837 355 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 TRIM49P0CI25 452 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 TRIM49CP0CI26 452 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 DLATP10515 647 aaKnown RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 KRT13P13646 458 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 VAMP7P51809 220 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 TTC3P53804 2025 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 MARSP56192 900 aaKnown RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 MCCD1P59942 119 aaPredicted RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 HTRA4P83105 476 aaPredicted RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 SMAD3P84022 425 aaKnown RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 BFSP1Q12934 665 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 CREBRFQ8IUR6 639 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 CD302Q8IX05 232 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 URGCPQ8TCY9 931 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 TMC2Q8TDI7 906 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 C18orf25Q96B23 403 aaPredicted RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 PPP1R10Q96QC0 940 aaKnown RBP18.87■□□□□ 0.61
TUBB3-211ENST00000556536 ZBED2Q9BTP6 218 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 HCSTQ9UBK5 93 aa18.87■□□□□ 0.61
TUBB3-211ENST00000556536 COL4A6Q14031 1691 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 KCNJ18B7U540 433 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 B4GALT3O60512 393 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 ZNF18P17022 549 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 RABGGTBP53611 331 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 KCNJ12Q14500 433 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 NAB2Q15742 525 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 ZBTB6Q15916 424 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 ZNF280BQ86YH2 543 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 OR5B17Q8NGF7 314 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 ZNF516Q92618 1163 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 FNBP1Q96RU3 617 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 YME1L1Q96TA2 773 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 CGRRF1Q99675 332 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 METTL14Q9HCE5 456 aaKnown RBP18.86■□□□□ 0.61
TUBB3-211ENST00000556536 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 TUBGCP4Q9UGJ1 667 aa18.86■□□□□ 0.61
TUBB3-211ENST00000556536 DDHD2O94830 711 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 THP07101 528 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 CLDN10P78369 228 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 TFAMQ00059 246 aaKnown RBP18.85■□□□□ 0.61
TUBB3-211ENST00000556536 SOX4Q06945 474 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-211ENST00000556536 TMEM132DQ14C87 1099 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 SURF1Q15526 300 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 TCP11X2Q5H9J9 407 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 DCAF17Q5H9S7 520 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-211ENST00000556536 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 FAM114A1Q8IWE2 563 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 RAD9AQ99638 391 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 RBSNQ9H1K0 784 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 MAGEC2Q9UBF1 373 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-211ENST00000556536 CACNG4Q9UBN1 327 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 DERAQ9Y315 318 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 C2CD2Q9Y426 696 aa18.85■□□□□ 0.61
TUBB3-211ENST00000556536 LCHNA4D1U4 455 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 TLL1O43897 1013 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 ATP1A3P13637 1013 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 MYOGP15173 224 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 TNNI1P19237 187 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 MTIF2P46199 727 aaKnown RBP18.84■□□□□ 0.61
TUBB3-211ENST00000556536 ENPEPQ07075 957 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 PPP3CAQ08209 521 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 GRIK3Q13003 919 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 TCERG1LQ5VWI1 586 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 WDR49Q8IV35 697 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 CMTR2Q8IYT2 770 aaKnown RBP18.84■□□□□ 0.61
TUBB3-211ENST00000556536 SLC35C1Q96A29 364 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 MTMR12Q9C0I1 747 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 GOLGA2P5Q9HBQ8 144 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 INTS13Q9NVM9 706 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms