RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MFSD14AQ96MC6 490 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ZFP42Q96MM3 310 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 UROC1Q96N76 676 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 SRRTQ9BXP5 876 aaKnown RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 SLC28A3Q9HAS3 691 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 RNF19AQ9NV58 838 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ARMCX3Q9UH62 379 aaPredicted RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 C2CD2Q9Y426 696 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 PCDHB12Q9Y5F1 795 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 PTPRSQ13332 1948 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 BECN2A8MW95 431 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 PTGESO14684 152 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 IKBKBO14920 756 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 ZC3H11AO75152 810 aaKnown RBP eCLIP8.27□□□□□ -1.09
TDP1-214ENST00000556063 PHACTR2O75167 634 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 AKAP3O75969 853 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 TNNC2P02585 160 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 TPM2P07951 284 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 TMEM191BP0C7N4 346 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 DLATP10515 647 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 PAX3P23760 479 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 DNAJB2P25686 324 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 RPL9P32969 192 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 PPM1AP35813 382 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 CASP4P49662 377 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 ZNF165P49910 485 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 GATMP50440 423 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 VAMP7P51809 220 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 TFAMQ00059 246 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 MYL5Q02045 173 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 DUOXA2Q1HG44 320 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 ANO6Q4KMQ2 910 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 GLRA4Q5JXX5 417 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 LRRC55Q6ZSA7 311 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 FRMD5Q7Z6J6 570 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 WDR49Q8IV35 697 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 ZC3H3Q8IXZ2 948 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 TIFAQ96CG3 184 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 ZNF558Q96NG5 402 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 PPP1R10Q96QC0 940 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 TGS1Q96RS0 853 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 DUSP9Q99956 384 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 BPIFA3Q9BQP9 254 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 COLEC11Q9BWP8 271 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 PLVAPQ9BX97 442 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 DNAJC25Q9H1X3 360 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 THAP9Q9H5L6 903 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 RC3H2Q9HBD1 1191 aaKnown RBP8.27□□□□□ -1.09
TDP1-214ENST00000556063 PDE11AQ9HCR9 933 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 STK39Q9UEW8 545 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 RALGAPA2Q2PPJ7 1873 aa8.27□□□□□ -1.09
TDP1-214ENST00000556063 ANK1P16157 1881 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 TMEM265A0A087WTH1 108 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 ARHGEF37A1IGU5 675 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 LINC01553A4QN01 128 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 GOLGA6L19H0YKK7 550 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 RB1P06400 928 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 CA3P07451 260 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 NFICP08651 508 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 GTF2H1P32780 548 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 CTNNB1P35222 781 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 BMPR1AP36894 532 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 OR1G1P47890 313 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 KRT17Q04695 432 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 SPAG1Q07617 926 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 DSC1Q08554 894 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 CETN1Q12798 172 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 BFSP1Q12934 665 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 BMS1Q14692 1282 aaKnown RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 ZBTB6Q15916 424 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 TCERG1LQ5VWI1 586 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 FAM109BQ6ICB4 259 aaPredicted RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 JADE1Q6IE81 842 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 DCLRE1AQ6PJP8 1040 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 KCNT2Q6UVM3 1135 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 C11orf57Q6ZUT1 292 aaPredicted RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 CREBRFQ8IUR6 639 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 COLGALT2Q8IYK4 626 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 GSTCDQ8NEC7 633 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 PARD3BQ8TEW8 1205 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 EEF2KMTQ96G04 330 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 TMEM169Q96HH4 297 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 CGRRF1Q99675 332 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 FUCA2Q9BTY2 467 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 C11orf84Q9BUA3 381 aaPredicted RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 NKX2-4Q9H2Z4 354 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 TSPY26PQ9H489 355 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 NRDE2Q9H7Z3 1164 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 INTS13Q9NVM9 706 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 MIOSQ9NXC5 875 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 SPG21Q9NZD8 308 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 PUF60Q9UHX1 559 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms