RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-234ENST00000555958 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-234ENST00000555958 MRI1Q9BV20 369 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 TEX101Q9BY14 249 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 LANCL2Q9NS86 450 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 INTUQ9ULD6 942 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 PCF11O94913 1555 aaKnown RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 DIRC3C9JPN6 131 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 ZNF185O15231 689 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 MT-CO1P00395 513 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 RAP2AP10114 183 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 MYBL2P10244 700 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 ZSCAN20P17040 1043 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 SLC6A9P48067 706 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 CHN2P52757 468 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 MTMR1Q13613 665 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 FAM50AQ14320 339 aaKnown RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 ACAP2Q15057 778 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 RHOUQ7L0Q8 258 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 PRPF38AQ8NAV1 312 aaKnown RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 OR2I1PQ8NGU4 316 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 CCHCR1Q8TD31 782 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 JADE3Q92613 823 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 CHFRQ96EP1 664 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 CYFIP2Q96F07 1278 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 AKIP1Q9NQ31 210 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 TRHDEQ9UKU6 1024 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 CHST2Q9Y4C5 530 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 WDR7Q9Y4E6 1490 aa6.32□□□□□ -1.4
ATXN3-234ENST00000555958 RIMS1Q86UR5 1692 aaKnown RBP6.32□□□□□ -1.4
ATXN3-234ENST00000555958 CARMIL1Q5VZK9 1371 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 ARID4BQ4LE39 1312 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-234ENST00000555958 KLHL33A6NCF5 533 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 FAM171A2A8MVW0 826 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 PPFIA4O75335 1185 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 KATNA1O75449 491 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 NCR1O76036 304 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 NDUFA10O95299 355 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 ABHD16AO95870 558 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 GUCY1A2P33402 732 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 PTPAQ15257 358 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 PDCD4Q53EL6 469 aaKnown RBP6.31□□□□□ -1.4
ATXN3-234ENST00000555958 LY6G5CQ5SRR4 150 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-234ENST00000555958 METRNLQ641Q3 311 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 MED25Q71SY5 747 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 SSH1Q8WYL5 1049 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 MYEOVQ96EZ4 313 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 CEP89Q96ST8 783 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 C7orf25Q9BPX7 421 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 USP15Q9Y4E8 981 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-234ENST00000555958 ACTL7AQ9Y615 435 aa6.31□□□□□ -1.4
ATXN3-234ENST00000555958 CFAP43Q8NDM7 1665 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 NDUFS2O75306 463 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 POMCP01189 267 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 ATP5JP18859 108 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 FPR1P21462 350 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 INHBCP55103 352 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 KCNV1Q6PIU1 500 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 Q6ZPA2 131 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 RPUSD2Q8IZ73 545 aaKnown RBP6.3□□□□□ -1.4
ATXN3-234ENST00000555958 MTMR8Q96EF0 704 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PRRX2Q99811 253 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 IKZF4Q9H2S9 585 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 MANSC1Q9H8J5 431 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PCDHGA9Q9Y5G4 932 aaKnown RBP6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PCDHGA7Q9Y5G6 932 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PCDHGA6Q9Y5G7 932 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 KIF27Q86VH2 1401 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 BCORL1Q5H9F3 1711 aa6.3□□□□□ -1.4
ATXN3-234ENST00000555958 WDR33Q9C0J8 1336 aaKnown RBP6.29□□□□□ -1.4
ATXN3-234ENST00000555958 KIAA0556O60303 1618 aa6.29□□□□□ -1.4
ATXN3-234ENST00000555958 A0A087X1B8 175 aa6.29□□□□□ -1.4
ATXN3-234ENST00000555958 TMEM191CA6NGB0 347 aa6.29□□□□□ -1.4
ATXN3-234ENST00000555958 ALG1L2C9J202 215 aa6.29□□□□□ -1.4
ATXN3-234ENST00000555958 AMY1AP04745 511 aa6.29□□□□□ -1.4
ATXN3-234ENST00000555958 SPATA31D3P0C874 917 aa6.29□□□□□ -1.4
ATXN3-234ENST00000555958 KRT4P19013 534 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms