RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 GOLGA8AA7E2F4 631 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 PRSS23O95084 383 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 ATP5JP18859 108 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 CXADRP78310 365 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 MUM1L1Q5H9M0 696 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 FATE1Q969F0 183 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 ACE2Q9BYF1 805 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-217ENST00000555953 REXO4Q9GZR2 422 aaKnown RBP5.67□□□□□ -1.5
SCFD1-217ENST00000555953 RNPEPQ9H4A4 650 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 LANCL2Q9NS86 450 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 RBM12Q9NTZ6 932 aaKnown RBP5.67□□□□□ -1.5
SCFD1-217ENST00000555953 FBXO34Q9NWN3 711 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 MOCS1Q9NZB8 636 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 TLK1Q9UKI8 766 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 AATKQ6ZMQ8 1374 aa5.67□□□□□ -1.5
SCFD1-217ENST00000555953 MGST3O14880 152 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 POMCP01189 267 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 IL2RBP14784 551 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 FPR1P21462 350 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 GCSHP23434 173 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 PER3P56645 1201 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 SCAND1P57086 179 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 HSD11B2P80365 405 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 SIM1P81133 766 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-217ENST00000555953 ZNF169Q14929 603 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-217ENST00000555953 UBXN2BQ14CS0 331 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 TOR2AQ5JU69 321 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 Q6ZNX1 250 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 NACC2Q96BF6 587 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 SENP6Q9GZR1 1112 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-217ENST00000555953 GALNT9Q9HCQ5 603 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 TMEM74BQ9NUR3 256 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 SLC23A1Q9UHI7 598 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 USP25Q9UHP3 1055 aa5.66□□□□□ -1.5
SCFD1-217ENST00000555953 MTHFD2P13995 350 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 ELLP55199 621 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-217ENST00000555953 SRSF2Q01130 221 aaKnown RBP5.65□□□□□ -1.5
SCFD1-217ENST00000555953 GJC2Q5T442 439 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-217ENST00000555953 OTUD7BQ6GQQ9 843 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 ZNF529Q6P280 563 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 FAM180AQ6UWF9 173 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 CAGE1Q8TC20 777 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 BOD1Q96IK1 185 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 MYOCQ99972 504 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 DUSP26Q9BV47 211 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 KCNE5Q9UJ90 142 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 AJAP1Q9UKB5 411 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-217ENST00000555953 TBX22Q9Y458 520 aa5.65□□□□□ -1.5
SCFD1-217ENST00000555953 GPANK1O95872 356 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 PCSK1P29120 753 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 MCAMP43121 646 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 SLC6A9P48067 706 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 SEPT2Q15019 361 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 NOMO1Q15155 1222 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 ANO4Q32M45 955 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 FAM43AQ8N2R8 423 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 NELL1Q92832 810 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 CASS4Q9NQ75 786 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 TBCCD1Q9NVR7 557 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 FOXJ2Q9P0K8 574 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 ACTL7AQ9Y615 435 aa5.64□□□□□ -1.51
SCFD1-217ENST00000555953 MATN4O95460 622 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 C1RP00736 705 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 IGLV2-14P01704 120 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 MALLQ13021 153 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 CYP2A13Q16696 494 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 SEM1Q6ZVN7 128 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 CASKIN2Q8WXE0 1202 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 ADI1Q9BV57 179 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 SPATA5L1Q9BVQ7 753 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 CAAP1Q9H8G2 361 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 KIAA1586Q9HCI6 787 aa5.63□□□□□ -1.51
SCFD1-217ENST00000555953 C1QL1O75973 258 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 GSPT1P15170 499 aaKnown RBP5.62□□□□□ -1.51
SCFD1-217ENST00000555953 RARRES1P49788 294 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 MRPS35P82673 323 aaKnown RBP5.62□□□□□ -1.51
SCFD1-217ENST00000555953 STAT4Q14765 748 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 TAF7LQ5H9L4 462 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 AIFM2Q9BRQ8 373 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 UNKLQ9H9P5 680 aaKnown RBP5.62□□□□□ -1.51
SCFD1-217ENST00000555953 TMEM140Q9NV12 185 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 C14orf119Q9NWQ9 140 aa5.62□□□□□ -1.51
SCFD1-217ENST00000555953 COL11A2P13942 1736 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-217ENST00000555953 BRINP1O60477 761 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 ENDOD1O94919 500 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 ZFPL1O95159 310 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 CKBP12277 381 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 SOX5P35711 763 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 GPR3P46089 330 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 VAV2P52735 878 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 MGAT2Q10469 447 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 FOXR2Q6PJQ5 311 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 ARHGEF25Q86VW2 580 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 OR2I1PQ8NGU4 316 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCFD1-217ENST00000555953 ACTRT2Q8TDY3 377 aa5.61□□□□□ -1.51
SCFD1-217ENST00000555953 PTCD3Q96EY7 689 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms