RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 VSTM4Q8IW00 320 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 POMGNT1Q8WZA1 660 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 SLC35C1Q96A29 364 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 IQCDQ96DY2 449 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 NAP1L5Q96NT1 182 aaPredicted RBP8.47□□□□□ -1.05
PCNX4-210ENST00000555740 OSMRQ99650 979 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 ERVK-5Q9HDB9 667 aa8.47□□□□□ -1.05
PCNX4-210ENST00000555740 TRMT13Q9NUP7 481 aaKnown RBP8.47□□□□□ -1.05
PCNX4-210ENST00000555740 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
PCNX4-210ENST00000555740 P4HA2O15460 535 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 B4GALT5O43286 388 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 STX10O60499 249 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 EXOC3O60645 756 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 SERPINC1P01008 464 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 CHRNA1P02708 482 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.05
PCNX4-210ENST00000555740 MTIF2P46199 727 aaKnown RBP8.46□□□□□ -1.05
PCNX4-210ENST00000555740 SNRNP35Q16560 246 aaKnown RBP8.46□□□□□ -1.05
PCNX4-210ENST00000555740 FBXO47Q5MNV8 452 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 C1orf220Q5T0J3 134 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 CRELD2Q6UXH1 353 aaPredicted RBP8.46□□□□□ -1.05
PCNX4-210ENST00000555740 FAM228AQ86W67 206 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 TMEM40Q8WWA1 233 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 MSTO1Q9BUK6 570 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 TRIM5Q9C035 493 aa8.46□□□□□ -1.05
PCNX4-210ENST00000555740 CPSF3Q9UKF6 684 aaKnown RBP8.46□□□□□ -1.05
PCNX4-210ENST00000555740 AGO2Q9UKV8 859 aaKnown RBP8.46□□□□□ -1.05
PCNX4-210ENST00000555740 MICAL3Q7RTP6 2002 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 TK2O00142 265 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 N4BP1O75113 896 aaKnown RBP8.46□□□□□ -1.06
PCNX4-210ENST00000555740 ERLIN2O94905 339 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 HOXA11P31270 313 aaPredicted RBP8.46□□□□□ -1.06
PCNX4-210ENST00000555740 DSC3Q14574 896 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 ZNF568Q3ZCX4 644 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 MSS51Q4VC12 460 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 FIGNQ5HY92 759 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 EEF1DP3Q658K8 133 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 NOTUMQ6P988 496 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 PPP1R13LQ8WUF5 828 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 SCLT1Q96NL6 688 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 TSPAN18Q96SJ8 248 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 MCOLN1Q9GZU1 580 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 NDST4Q9H3R1 872 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 CHST12Q9NRB3 414 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 CXXC1Q9P0U4 656 aaPredicted RBP8.46□□□□□ -1.06
PCNX4-210ENST00000555740 IMPACTQ9P2X3 320 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 NOD1Q9Y239 953 aa8.46□□□□□ -1.06
PCNX4-210ENST00000555740 TLR3O15455 904 aaKnown RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CLDN3O15551 220 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 AFPP02771 609 aaKnown RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CKBP12277 381 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 GRM5P41594 1212 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 TBX2Q13207 712 aaPredicted RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 TRIM14Q14142 442 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SURF1Q15526 300 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 UBXN11Q5T124 520 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CEP135Q66GS9 1140 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SLC27A1Q6PCB7 646 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SLC39A5Q6ZMH5 540 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 USP37Q86T82 979 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CBWD2Q8IUF1 395 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 PLEKHO2Q8TD55 490 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 ANP32BQ92688 251 aaKnown RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CGRRF1Q99675 332 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 NOC4LQ9BVI4 516 aaKnown RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 TRPV6Q9H1D0 765 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SIK3Q9Y2K2 1263 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 NOC2LQ9Y3T9 749 aaKnown RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 ZNF233A6NK53 670 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 IL18RAPO95256 599 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 PARNO95453 639 aaKnown RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 KRT13P13646 458 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 THPOP40225 353 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 VAMP7P51809 220 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 BFSP2Q13515 415 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 LPIN1Q14693 890 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 DPY19L2P1Q6NXN4 242 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 C15orf39Q6ZRI6 1047 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 CATSPER4Q7RTX7 472 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SIX5Q8N196 739 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 ZSWIM2Q8NEG5 633 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SAAL1Q96ER3 474 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 ZBTB45Q96K62 511 aaPredicted RBP8.45□□□□□ -1.06
PCNX4-210ENST00000555740 ANKFY1Q9P2R3 1169 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 TBX21Q9UL17 535 aa8.45□□□□□ -1.06
PCNX4-210ENST00000555740 SCN5AQ14524 2016 aa8.44□□□□□ -1.06
PCNX4-210ENST00000555740 TFRCP02786 760 aaKnown RBP8.44□□□□□ -1.06
PCNX4-210ENST00000555740 CLTAP09496 248 aa8.44□□□□□ -1.06
PCNX4-210ENST00000555740 SELPP16109 830 aa8.44□□□□□ -1.06
PCNX4-210ENST00000555740 AP3M2P53677 418 aa8.44□□□□□ -1.06
PCNX4-210ENST00000555740 SEC13P55735 322 aa8.44□□□□□ -1.06
PCNX4-210ENST00000555740 TMEM62Q0P6H9 643 aa8.44□□□□□ -1.06
PCNX4-210ENST00000555740 HSP90AA4PQ58FG1 418 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms