RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SYCE2Q6PIF2 218 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 ZPBP2Q6X784 338 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 UNC13DQ70J99 1090 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 DYMQ7RTS9 669 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 GPR65Q8IYL9 337 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 SPATA20Q8TB22 786 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 SLC22A17Q8WUG5 538 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 ERCC4Q92889 916 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-215ENST00000555616 S1PR5Q9H228 398 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 DZANK1Q9NVP4 752 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 TCF20Q9UGU0 1960 aaKnown RBP10.52□□□□□ -0.73
ACTN1-215ENST00000555616 BIN1O00499 593 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 TOM1L1O75674 476 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 FAM13AO94988 1023 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 KIF4AO95239 1232 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 THP07101 528 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CNPP09543 421 aaKnown RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 GAP43P17677 238 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CASP1P29466 404 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CA8P35219 290 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 GLUD2P49448 558 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 DSG1Q02413 1049 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 TYRO3Q06418 890 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 STRN3Q13033 797 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 HSP90AA2PQ14568 343 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 STX1AQ16623 288 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 XKR4Q5GH76 650 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 FUT10Q6P4F1 479 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 MPZL3Q6UWV2 235 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 PPFIBP1Q86W92 1011 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CEP120Q8N960 986 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 KHSRPQ92945 711 aaKnown RBP eCLIP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 DNAJC19Q96DA6 116 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 SNX27Q96L92 541 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 PPP1R10Q96QC0 940 aaKnown RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CCDC94Q9BW85 323 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 COLEC11Q9BWP8 271 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 C1QTNF1Q9BXJ1 281 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 EMILIN2Q9BXX0 1053 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CXCL16Q9H2A7 254 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 ZHX3Q9H4I2 956 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 MRPL17Q9NRX2 175 aaKnown RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 TOPORSQ9NS56 1045 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-215ENST00000555616 CHST7Q9NS84 486 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 PANK4Q9NVE7 773 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 DACH1Q9UI36 760 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 ADAM28Q9UKQ2 775 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 SSX2IPQ9Y2D8 614 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 GDAQ9Y2T3 454 aa10.51□□□□□ -0.73
ACTN1-215ENST00000555616 SF3B1O75533 1304 aaKnown RBP eCLIP10.51□□□□□ -0.734e-6■■■■■ 130.8
ACTN1-215ENST00000555616 CASTOR2A6NHX0 329 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 TMEM189-UBE2V1I3L0A0 370 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 RHOBTB3O94955 611 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 CAVIN2O95810 425 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 PIGRP01833 764 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 EPCAMP16422 314 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 PLA2G5P39877 138 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 CLCN4P51793 760 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
ACTN1-215ENST00000555616 NLRP12P59046 1061 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 ITIH3Q06033 890 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 MCL1Q07820 350 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 PSMD2Q13200 908 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 CBX2Q14781 532 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-215ENST00000555616 NOLC1Q14978 699 aaKnown RBP eCLIP10.5□□□□□ -0.738e-10■□□□□ 9.7
ACTN1-215ENST00000555616 KMT5BQ4FZB7 885 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 KIAA0319Q5VV43 1072 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 TAS1R1Q7RTX1 841 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 HAUS6Q7Z4H7 955 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 KLHL5Q96PQ7 755 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 FIZ1Q96SL8 496 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 PAAF1Q9BRP4 392 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 PHF7Q9BWX1 381 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-215ENST00000555616 GPR62Q9BZJ7 368 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 NAT10Q9H0A0 1025 aaKnown RBP10.5□□□□□ -0.73
ACTN1-215ENST00000555616 ADAM7Q9H2U9 754 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 RXFP1Q9HBX9 757 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 ANKFY1Q9P2R3 1169 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 CACNG4Q9UBN1 327 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 MAN1B1Q9UKM7 699 aa10.5□□□□□ -0.73
ACTN1-215ENST00000555616 TDRD15B5MCY1 1934 aaKnown RBP10.49□□□□□ -0.73
ACTN1-215ENST00000555616 SMIM28A0A1B0GU29 152 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 FRMD3A2A2Y4 597 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 LOC730098B7Z3J9 87 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 K7ENM7 598 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 TEX28O15482 410 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 MEFVO15553 781 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-215ENST00000555616 KLRC4O43908 158 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 C1RP00736 705 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 ADH1AP07327 375 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 KCNE1P15382 129 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 ABCD1P33897 745 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 PPP1R2P41236 205 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms