RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TGFBRAP1Q8WUH2 860 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 QRSL1Q9H0R6 528 aaKnown RBP5.28□□□□□ -1.56
SCFD1-216ENST00000555550 KLK15Q9H2R5 256 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 CASS4Q9NQ75 786 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 IL17RBQ9NRM6 502 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 GPRC5DQ9NZD1 345 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 FOXJ2Q9P0K8 574 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 DPP7Q9UHL4 492 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 NOX1Q9Y5S8 564 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 ADCY6O43306 1168 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 ZNF81P51508 661 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 CACNA2D1P54289 1103 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 SCAND1P57086 179 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 MEF2AQ02078 507 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-216ENST00000555550 ARMC6Q6NXE6 501 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 MED25Q71SY5 747 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 SLC41A1Q8IVJ1 513 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 RHOT2Q8IXI1 618 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 AFAP1L2Q8N4X5 818 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 REPS2Q8NFH8 660 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 ATL2Q8NHH9 583 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 RNF31Q96EP0 1072 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 PAWRQ96IZ0 340 aaKnown RBP5.27□□□□□ -1.57
SCFD1-216ENST00000555550 ZNF778Q96MU6 729 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 ASB6Q9NWX5 421 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 LRIT1Q9P2V4 623 aa5.27□□□□□ -1.57
SCFD1-216ENST00000555550 CGB1A6NKQ9 187 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 CTSSP25774 331 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 CLRN1P58418 232 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 FAPQ12884 760 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 PDZD4Q76G19 769 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-216ENST00000555550 CMIPQ8IY22 773 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 FBXO18Q8NFZ0 1043 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 WDR66Q8TBY9 1149 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 AUTS2Q8WXX7 1259 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 AHCYL2Q96HN2 611 aaKnown RBP5.26□□□□□ -1.57
SCFD1-216ENST00000555550 ZBTB21Q9ULJ3 1066 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 PRKAB1Q9Y478 270 aa5.26□□□□□ -1.57
SCFD1-216ENST00000555550 CCDC78A2IDD5 438 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 CXorf49A8MYA2 514 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-216ENST00000555550 WNT10BO00744 389 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 PTPN7P35236 360 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 RAP2BP61225 183 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 MRPS35P82673 323 aaKnown RBP5.25□□□□□ -1.57
SCFD1-216ENST00000555550 KRT26Q7Z3Y9 468 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 ZNF366Q8N895 744 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 ZNF480Q8WV37 535 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 PDLIM2Q96JY6 352 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 AIFM2Q9BRQ8 373 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 VTA1Q9NP79 307 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 TBCCD1Q9NVR7 557 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 C14orf119Q9NWQ9 140 aa5.25□□□□□ -1.57
SCFD1-216ENST00000555550 RPTORQ8N122 1335 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 A0A1B0GTW7 788 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 AKR1B10O60218 316 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 GASTP01350 101 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 MTHFD2P13995 350 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 ADSLP30566 484 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-216ENST00000555550 FLT3LGP49771 235 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 MRPS9P82933 396 aaKnown RBP5.24□□□□□ -1.57
SCFD1-216ENST00000555550 OCA2Q04671 838 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 FAM47AQ5JRC9 791 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 TOR2AQ5JU69 321 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 FAM180AQ6UWF9 173 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 LHFPL2Q6ZUX7 228 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 SPATS2Q86XZ4 545 aaKnown RBP5.24□□□□□ -1.57
SCFD1-216ENST00000555550 ACTRT2Q8TDY3 377 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 LMBR1Q8WVP7 490 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 NACC2Q96BF6 587 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 ACE2Q9BYF1 805 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-216ENST00000555550 AATKQ6ZMQ8 1374 aa5.24□□□□□ -1.57
SCFD1-216ENST00000555550 WASHC2AQ641Q2 1341 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 GPR39O43194 453 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 PHF2O75151 1096 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 EYA4O95677 639 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 CXADRP78310 365 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 EGFLAMQ63HQ2 1017 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 C1QL2Q7Z5L3 287 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 C9orf106Q8NAJ2 232 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 COG1Q8WTW3 980 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 RIN2Q8WYP3 895 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-216ENST00000555550 DDB2Q92466 427 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 PTCD3Q96EY7 689 aaKnown RBP5.23□□□□□ -1.57
SCFD1-216ENST00000555550 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-216ENST00000555550 IFT122Q9HBG6 1241 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 SLC17A6Q9P2U8 582 aa5.23□□□□□ -1.57
SCFD1-216ENST00000555550 PJA2O43164 708 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 IGSF3O75054 1194 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 PRKD3O94806 890 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 PRSS23O95084 383 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 VIL1P09327 827 aaKnown RBP5.22□□□□□ -1.57
SCFD1-216ENST00000555550 CTGFP29279 349 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 CRHR1P34998 444 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 PER3P56645 1201 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 PROK1P58294 105 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 HSD11B2P80365 405 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 SRSF2Q01130 221 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms