RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 HAUS6Q7Z4H7 955 aa26.74■■□□□ 1.87
PRKCH-216ENST00000555542 ZDHHC14Q8IZN3 488 aa26.74■■□□□ 1.87
PRKCH-216ENST00000555542 LARP4BQ92615 738 aaKnown RBP26.74■■□□□ 1.87
PRKCH-216ENST00000555542 PARVGQ9HBI0 331 aa26.74■■□□□ 1.87
PRKCH-216ENST00000555542 CCDC39Q9UFE4 941 aa26.74■■□□□ 1.87
PRKCH-216ENST00000555542 ARIH1Q9Y4X5 557 aaPredicted RBP26.74■■□□□ 1.87
PRKCH-216ENST00000555542 ABLIM1O14639 778 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 C1RP00736 705 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 PLA2G5P39877 138 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 LIG4P49917 911 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 PTPAQ15257 358 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 SEZ6Q53EL9 994 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 ALKAL1Q6UXT8 129 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 CYP26C1Q6V0L0 522 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 SUGP1Q8IWZ8 645 aaKnown RBP26.73■■□□□ 1.87
PRKCH-216ENST00000555542 LNX1Q8TBB1 728 aaPredicted RBP26.73■■□□□ 1.87
PRKCH-216ENST00000555542 LRRC15Q8TF66 581 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 STAMQ92783 540 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 DDX27Q96GQ7 796 aaKnown RBP26.73■■□□□ 1.87
PRKCH-216ENST00000555542 CCSER1Q9C0I3 900 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 TECTAO75443 2155 aa26.73■■□□□ 1.87
PRKCH-216ENST00000555542 ASGR2P07307 311 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 XKR4Q5GH76 650 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 LIN9Q5TKA1 542 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 EPSTI1Q96J88 318 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 CLSTN3Q9BQT9 956 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 ZDHHC7Q9NXF8 308 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 CNTN3Q9P232 1028 aa26.72■■□□□ 1.87
PRKCH-216ENST00000555542 VWA8A3KMH1 1905 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 I3L4J1 428 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 PODXLO00592 558 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 HNRNPDLO14979 420 aaKnown RBP26.71■■□□□ 1.87
PRKCH-216ENST00000555542 TRAK2O60296 914 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 GBP2P32456 591 aaPredicted RBP26.71■■□□□ 1.87
PRKCH-216ENST00000555542 SOX4Q06945 474 aaPredicted RBP26.71■■□□□ 1.87
PRKCH-216ENST00000555542 BMP8AQ7Z5Y6 402 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 UBALD2Q8IYN6 164 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 KRI1Q8N9T8 703 aaKnown RBP26.71■■□□□ 1.87
PRKCH-216ENST00000555542 ZMAT2Q96NC0 199 aaKnown RBP26.71■■□□□ 1.87
PRKCH-216ENST00000555542 FBXO2Q9UK22 296 aaPredicted RBP26.71■■□□□ 1.87
PRKCH-216ENST00000555542 MTMR6Q9Y217 621 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 NUB1Q9Y5A7 615 aa26.71■■□□□ 1.87
PRKCH-216ENST00000555542 CLUHO75153 1309 aa26.7■■□□□ 1.87
PRKCH-216ENST00000555542 STX6O43752 255 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 KCNE1P15382 129 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 SCP2P22307 547 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 FGFR3P22607 806 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 DDIT3P35638 169 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 BRCC3P46736 316 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 MCL1Q07820 350 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 LILRA6Q6PI73 481 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 C3orf58Q8NDZ4 430 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 ZSCAN16Q9H4T2 348 aaPredicted RBP26.7■■□□□ 1.86
PRKCH-216ENST00000555542 WDR6Q9NNW5 1121 aaKnown RBP26.7■■□□□ 1.86
PRKCH-216ENST00000555542 TBX20Q9UMR3 447 aa26.7■■□□□ 1.86
PRKCH-216ENST00000555542 SRPRBQ9Y5M8 271 aaKnown RBP26.7■■□□□ 1.86
PRKCH-216ENST00000555542 IGFBP6P24592 240 aaPredicted RBP26.69■■□□□ 1.86
PRKCH-216ENST00000555542 TKTP29401 623 aaKnown RBP26.69■■□□□ 1.86
PRKCH-216ENST00000555542 USP49Q70CQ1 688 aa26.69■■□□□ 1.86
PRKCH-216ENST00000555542 C18orf25Q96B23 403 aaPredicted RBP26.69■■□□□ 1.86
PRKCH-216ENST00000555542 CLIC6Q96NY7 704 aa26.69■■□□□ 1.86
PRKCH-216ENST00000555542 FBXW11Q9UKB1 542 aa26.69■■□□□ 1.86
PRKCH-216ENST00000555542 MYO10Q9HD67 2058 aa26.69■■□□□ 1.86
PRKCH-216ENST00000555542 ZMYND10O75800 440 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 HSP90AA1P07900 732 aaKnown RBP26.68■■□□□ 1.86
PRKCH-216ENST00000555542 CXCL8P10145 99 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 RPL9P32969 192 aaKnown RBP26.68■■□□□ 1.86
PRKCH-216ENST00000555542 OR1D2P34982 312 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 ZNF131P52739 623 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 SLC10A6Q3KNW5 377 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 PPM1LQ5SGD2 360 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 RRAGBQ5VZM2 374 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 ANKS3Q6ZW76 656 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 ZNF707Q96C28 371 aaPredicted RBP26.68■■□□□ 1.86
PRKCH-216ENST00000555542 RHOBTB2Q9BYZ6 727 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 PRKD2Q9BZL6 878 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 STK17AQ9UEE5 414 aa26.68■■□□□ 1.86
PRKCH-216ENST00000555542 ADAM12O43184 909 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 C8AP07357 584 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 CLTAP09496 248 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 ABCD1P33897 745 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 PPP2R3AQ06190 1150 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 KYAT1Q16773 422 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 DYMQ7RTS9 669 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 HSCBQ8IWL3 235 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 FBXL6Q8N531 539 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 ASIC4Q96FT7 647 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 USP28Q96RU2 1077 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 MTRRQ9UBK8 725 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 POLIQ9UNA4 740 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 CDY1Q9Y6F8 540 aa26.67■■□□□ 1.86
PRKCH-216ENST00000555542 PDCD11Q14690 1871 aaKnown RBP26.67■■□□□ 1.86
PRKCH-216ENST00000555542 MCM4P33991 863 aa26.66■■□□□ 1.86
PRKCH-216ENST00000555542 CD300LGQ6UXG3 332 aa26.66■■□□□ 1.86
PRKCH-216ENST00000555542 GET4Q7L5D6 327 aaPredicted RBP26.66■■□□□ 1.86
PRKCH-216ENST00000555542 HAPLN2Q9GZV7 340 aa26.66■■□□□ 1.86
PRKCH-216ENST00000555542 SMOC2Q9H3U7 446 aa26.66■■□□□ 1.86
PRKCH-216ENST00000555542 PLEKHA5Q9HAU0 1116 aa26.66■■□□□ 1.86
PRKCH-216ENST00000555542 NMT1P30419 496 aaKnown RBP26.65■■□□□ 1.86
PRKCH-216ENST00000555542 SPAG1Q07617 926 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms