RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 KAT6AQ92794 2004 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 E9PSI1 815 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 GCOM1H8Y6P7 765 aaPredicted RBP4.65□□□□□ -1.67
SRP54-207ENST00000555535 CBX4O00257 560 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 CCKARP32238 428 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 PLCD1P51178 756 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 HSD11B2P80365 405 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 UBE2R2Q712K3 238 aaPredicted RBP4.65□□□□□ -1.67
SRP54-207ENST00000555535 ZDHHC17Q8IUH5 632 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 LILRB2Q8N423 598 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 SLC35B2Q8TB61 432 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 SSH3Q8TE77 659 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 HMCESQ96FZ2 354 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 SRPK1Q96SB4 655 aaKnown RBP4.65□□□□□ -1.67
SRP54-207ENST00000555535 NCOA5Q9HCD5 579 aaKnown RBP4.65□□□□□ -1.67
SRP54-207ENST00000555535 OXSMQ9NWU1 459 aa4.65□□□□□ -1.67
SRP54-207ENST00000555535 TRGV11A0A075B6L2 103 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 CXorf49A8MYA2 514 aaPredicted RBP4.64□□□□□ -1.67
SRP54-207ENST00000555535 PPEF2O14830 753 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 PHF2O75151 1096 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 RAPGEF3O95398 923 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 CD1AP06126 327 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 CKBP12277 381 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 MAPK10P53779 464 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 PPARAQ07869 468 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 FAM153CQ494X1 144 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 GJC2Q5T442 439 aaPredicted RBP4.64□□□□□ -1.67
SRP54-207ENST00000555535 PEG10Q86TG7 708 aaKnown RBP4.64□□□□□ -1.67
SRP54-207ENST00000555535 MED15Q96RN5 788 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 ANO3Q9BYT9 981 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 MSRAQ9UJ68 235 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 ZKSCAN5Q9Y2L8 839 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 PTCH2Q9Y6C5 1203 aa4.64□□□□□ -1.67
SRP54-207ENST00000555535 CACNA1IQ9P0X4 2223 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 PLD2O14939 933 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 OPA1O60313 960 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 C2orf27AQ580R0 203 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 ZBTB41Q5SVQ8 909 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 GPR158Q5T848 1215 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 CREB3L3Q68CJ9 461 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 ABHD15Q6UXT9 468 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 EFHBQ8N7U6 833 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 OR14C36Q8NHC7 312 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 NELL2Q99435 816 aa4.63□□□□□ -1.67
SRP54-207ENST00000555535 PROM1O43490 865 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 POMCP01189 267 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 SRGNP10124 158 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 SLC44A4Q53GD3 710 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 VWA1Q6PCB0 445 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 ZNF572Q7Z3I7 529 aaPredicted RBP4.62□□□□□ -1.67
SRP54-207ENST00000555535 AMIGO2Q86SJ2 522 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 MKL1Q969V6 931 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 PRSS50Q9UI38 385 aa4.62□□□□□ -1.67
SRP54-207ENST00000555535 MYMKA6NI61 221 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 TMEM127O75204 238 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 DNAJC8O75937 253 aaPredicted RBP4.61□□□□□ -1.67
SRP54-207ENST00000555535 CTSSP25774 331 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 PTPN7P35236 360 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 RAP2BP61225 183 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 ZNF460Q14592 562 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 SF3B3Q15393 1217 aaKnown RBP4.61□□□□□ -1.67
SRP54-207ENST00000555535 FBXL20Q96IG2 436 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 ZNF496Q96IT1 587 aaPredicted RBP4.61□□□□□ -1.67
SRP54-207ENST00000555535 C8orf37Q96NL8 207 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 IFT57Q9NWB7 429 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 EVLQ9UI08 416 aaPredicted RBP4.61□□□□□ -1.67
SRP54-207ENST00000555535 KCNG1Q9UIX4 513 aa4.61□□□□□ -1.67
SRP54-207ENST00000555535 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 LATS1O95835 1130 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 EPHB2P29323 1055 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 SP140Q13342 867 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 UBXN2BQ14CS0 331 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 PTPRRQ15256 657 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 FNDC3BQ53EP0 1204 aaKnown RBP4.6□□□□□ -1.67
SRP54-207ENST00000555535 DLK2Q6UY11 383 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 KRT73Q86Y46 540 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 ADAMTS15Q8TE58 950 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 HAPLN3Q96S86 360 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 TMEM79Q9BSE2 394 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 MTMR4Q9NYA4 1195 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 MOCS1Q9NZB8 636 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 PADI4Q9UM07 663 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 PNPLA7Q6ZV29 1317 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 RPTORQ8N122 1335 aa4.6□□□□□ -1.67
SRP54-207ENST00000555535 PRSS38A1L453 326 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 GAS7O60861 476 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 TFF2Q03403 129 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 GEN1Q17RS7 908 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 AATKQ6ZMQ8 1374 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 KIF18BQ86Y91 864 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 PMFBP1Q8TBY8 1022 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 PGBD1Q96JS3 809 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 PNKPQ96T60 521 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 ORAI3Q9BRQ5 295 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 EBF3Q9H4W6 596 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 ELOVL5Q9NYP7 299 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 USP25Q9UHP3 1055 aa4.59□□□□□ -1.67
SRP54-207ENST00000555535 CYSRT1A8MQ03 144 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 ERVV-2B6SEH9 535 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 KRT10P13645 584 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms