RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 MRPL10Q7Z7H8 261 aaKnown RBP10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ZSWIM2Q8NEG5 633 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 RABGGTAQ92696 567 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 HVCN1Q96D96 273 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 PPP1R13BQ96KQ4 1090 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 FAM193BQ96PV7 902 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-213ENST00000555386 RPS6KC1Q96S38 1066 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 STRA6Q9BX79 667 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 GTPBP4Q9BZE4 634 aaKnown RBP10.72□□□□□ -0.69
PSEN1-213ENST00000555386 TMEM117Q9H0C3 514 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ST6GALNAC4Q9H4F1 302 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 PTPRHQ9HD43 1115 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 MIOSQ9NXC5 875 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 COL4A6Q14031 1691 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 NT5C1B-RDH14C9J2C7 533 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ABLIM1O14639 778 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 EIF3DO15371 548 aaKnown RBP eCLIP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 STX10O60499 249 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ZC3H11AO75152 810 aaKnown RBP eCLIP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 PROZP22891 400 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ABCD1P33897 745 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 YARSP54577 528 aaKnown RBP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 MCL1Q07820 350 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 EHHADHQ08426 723 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 PSMD2Q13200 908 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 NR1I3Q14994 352 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 GLIPR1L2Q4G1C9 344 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 CDKAL1Q5VV42 579 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 LRRC55Q6ZSA7 311 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 EPM2AIP1Q7L775 607 aaPredicted RBP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 CMTR2Q8IYT2 770 aaKnown RBP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF507Q8TCN5 953 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ACAP3Q96P50 834 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 CBWD1Q9BRT8 395 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 TTYH1Q9H313 450 aaPredicted RBP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 PRDM12Q9H4Q4 367 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF576Q9H609 170 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 TMEM206Q9H813 350 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 INTS13Q9NVM9 706 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 CACNG4Q9UBN1 327 aa10.71□□□□□ -0.69
PSEN1-213ENST00000555386 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
PSEN1-213ENST00000555386 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.7
PSEN1-213ENST00000555386 ANK1P16157 1881 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 A0A0B4J269 797 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 PPP1R3GB7ZBB8 358 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 OGTO15294 1046 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 PIGRP01833 764 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 CXCL8P10145 99 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 SCP2P22307 547 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 ADSSP30520 456 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 GRM5P41594 1212 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 FILIP1LQ4L180 1135 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 ZNF658Q5TYW1 1059 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 SLFN12LQ6IEE8 588 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 KLHL10Q6JEL2 608 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 LRRC43Q8N309 656 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 TMEM130Q8N3G9 435 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 RDH13Q8NBN7 331 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 GDPD5Q8WTR4 605 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 MED15Q96RN5 788 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 TGS1Q96RS0 853 aaKnown RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 RPF1Q9H9Y2 349 aaKnown RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 RC3H2Q9HBD1 1191 aaKnown RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 UBN1Q9NPG3 1134 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 TBC1D13Q9NVG8 400 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 TRMT1Q9NXH9 659 aaKnown RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 DNAJB4Q9UDY4 337 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 RWDD2AQ9UIY3 292 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 PLAGL2Q9UPG8 496 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 GIT1Q9Y2X7 761 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 PRRC2BQ5JSZ5 2229 aaKnown RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 PRUNE2Q8WUY3 3088 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
PSEN1-213ENST00000555386 RALGAPA2Q2PPJ7 1873 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 TRANK1O15050 2925 aa10.7□□□□□ -0.7
PSEN1-213ENST00000555386 REV3LO60673 3130 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 EPOPA6NHQ4 379 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 CASTOR2A6NHX0 329 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 CLTAP09496 248 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 OR1G1P47890 313 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 KCNB1Q14721 858 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 GRIN2CQ14957 1233 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 KNOP1Q1ED39 458 aaKnown RBP10.69□□□□□ -0.7
PSEN1-213ENST00000555386 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 HS2ST1Q7LGA3 356 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-213ENST00000555386 PANX2Q96RD6 677 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 BAG1Q99933 345 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-213ENST00000555386 NAA15Q9BXJ9 866 aaKnown RBP10.69□□□□□ -0.7
PSEN1-213ENST00000555386 MFRPQ9BY79 579 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms