RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 ZNF528Q3MIS6 628 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 GLRA4Q5JXX5 417 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 EEF1DP3Q658K8 133 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 NPAS3Q8IXF0 933 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 C8orf76Q96K31 380 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 PPP1R10Q96QC0 940 aaKnown RBP17.02■□□□□ 0.32
NEDD1-207ENST00000555114 NELL2Q99435 816 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 KXD1Q9BQD3 176 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 DDX23Q9BUQ8 820 aaKnown RBP17.02■□□□□ 0.32
NEDD1-207ENST00000555114 SLC38A7Q9NVC3 462 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 GDE1Q9NZC3 331 aa17.02■□□□□ 0.32
NEDD1-207ENST00000555114 MRPS17Q9Y2R5 130 aaKnown RBP17.02■□□□□ 0.32
NEDD1-207ENST00000555114 FAM170BA6NMN3 283 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 SPTLC1O15269 473 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 ECI2O75521 394 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 GLULP15104 373 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 CCT6AP40227 531 aaKnown RBP17.01■□□□□ 0.31
NEDD1-207ENST00000555114 ZNF174Q15697 407 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 UPP1Q16831 310 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 ZBTB41Q5SVQ8 909 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 DGLUCYQ7Z3D6 616 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 RAB34Q9BZG1 259 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 FOXP1Q9H334 677 aaPredicted RBP17.01■□□□□ 0.31
NEDD1-207ENST00000555114 HCFC1R1Q9NWW0 138 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
NEDD1-207ENST00000555114 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
NEDD1-207ENST00000555114 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 USP20Q9Y2K6 914 aa17.01■□□□□ 0.31
NEDD1-207ENST00000555114 NEFLP07196 543 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 RHOP08100 348 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 TKTP29401 623 aaKnown RBP17■□□□□ 0.31
NEDD1-207ENST00000555114 TRAPPC10P48553 1259 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 GUCY1B3Q02153 619 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 PUM1Q14671 1186 aaKnown RBP eCLIP17■□□□□ 0.31
NEDD1-207ENST00000555114 TTC38Q5R3I4 469 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 ZNF461Q8TAF7 563 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 ATRIPQ8WXE1 791 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 ING5Q8WYH8 240 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 SECISBP2LQ93073 1101 aaKnown RBP17■□□□□ 0.31
NEDD1-207ENST00000555114 CXCL16Q9H2A7 254 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 LTB4R2Q9NPC1 389 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 AVENQ9NQS1 362 aaPredicted RBP17■□□□□ 0.31
NEDD1-207ENST00000555114 LRWD1Q9UFC0 647 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 EP300Q09472 2414 aaPredicted RBP17■□□□□ 0.31
NEDD1-207ENST00000555114 MYH15Q9Y2K3 1946 aa17■□□□□ 0.31
NEDD1-207ENST00000555114 VPS13AQ96RL7 3174 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 SMIM28A0A1B0GU29 152 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 CCDC169A6NNP5 214 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 H7C4K7 107 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 PRRG1O14668 218 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 SYN3O14994 580 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 LRRN2O75325 713 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 PTPN2P17706 415 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 GRM5P41594 1212 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 FXR2P51116 673 aaKnown RBP eCLIP16.99■□□□□ 0.31
NEDD1-207ENST00000555114 DMP1Q13316 513 aaPredicted RBP16.99■□□□□ 0.31
NEDD1-207ENST00000555114 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 NT5DC1Q5TFE4 455 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 SLC8B1Q6J4K2 584 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 ZNF852Q6ZMS4 543 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 TPRG1Q6ZUI0 275 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 ELMOD1Q8N336 334 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 RMDN1Q96DB5 314 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 MCRS1Q96EZ8 462 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 MRPL4Q9BYD3 311 aaKnown RBP16.99■□□□□ 0.31
NEDD1-207ENST00000555114 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 PCDHGA2Q9Y5H1 932 aa16.99■□□□□ 0.31
NEDD1-207ENST00000555114 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 PODXLO00592 558 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 ZNF197O14709 1029 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 EDN1P05305 212 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 BRCC3P46736 316 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 ROR1Q01973 937 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 CSTF1Q05048 431 aaKnown RBP16.98■□□□□ 0.31
NEDD1-207ENST00000555114 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
NEDD1-207ENST00000555114 DNASE1L2Q92874 299 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 ELSPBP1Q96BH3 223 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 DRC1Q96MC2 740 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 LLPHQ9BRT6 129 aaKnown RBP16.98■□□□□ 0.31
NEDD1-207ENST00000555114 TCHPQ9BT92 498 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 TMEM134Q9H6X4 195 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 GOLGA2P5Q9HBQ8 144 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 NCDNQ9UBB6 729 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 MIA3Q5JRA6 1907 aa16.98■□□□□ 0.31
NEDD1-207ENST00000555114 I3L4J1 428 aa16.97■□□□□ 0.31
NEDD1-207ENST00000555114 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
NEDD1-207ENST00000555114 PEX3P56589 373 aa16.97■□□□□ 0.31
NEDD1-207ENST00000555114 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
NEDD1-207ENST00000555114 PDIA5Q14554 519 aa16.97■□□□□ 0.31
NEDD1-207ENST00000555114 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
NEDD1-207ENST00000555114 CYP4A22Q5TCH4 519 aa16.97■□□□□ 0.31
NEDD1-207ENST00000555114 IQCEQ6IPM2 695 aa16.97■□□□□ 0.31
NEDD1-207ENST00000555114 PDZD4Q76G19 769 aaPredicted RBP16.97■□□□□ 0.31
NEDD1-207ENST00000555114 MAML2Q8IZL2 1156 aaPredicted RBP16.97■□□□□ 0.31
NEDD1-207ENST00000555114 FAM184AQ8NB25 1140 aa16.97■□□□□ 0.31
NEDD1-207ENST00000555114 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms