RNA–Protein interactions for RNA: ENST00000555078.2

RAB42P1-201, Transcript of RAB42, member RAS oncogene family, pseudogene 1, humanhuman

BASIC

Gene RAB42P1, Length 316 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42P1-201ENST00000555078 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 USP49Q70CQ1 688 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 HAUS6Q7Z4H7 955 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 KCNN1Q92952 543 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 PBXIP1Q96AQ6 731 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 ACAP3Q96P50 834 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 HAPLN2Q9GZV7 340 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 SMOC2Q9H3U7 446 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 CNTN3Q9P232 1028 aa13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
RAB42P1-201ENST00000555078 I3L4J1 428 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 N4BP1O75113 896 aaKnown RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 KCNE1P15382 129 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 MARCKSP29966 332 aaPredicted RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 BRCC3P46736 316 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 ZNF131P52739 623 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 MCL1Q07820 350 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 MTMR3Q13615 1198 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 OTOP3Q7RTS5 596 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 RASSF8Q8NHQ8 419 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 SMG7Q92540 1137 aaKnown RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 LARP4BQ92615 738 aaKnown RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 ACSF2Q96CM8 615 aaPredicted RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 EPSTI1Q96J88 318 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 WDR6Q9NNW5 1121 aaKnown RBP13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 FBXW11Q9UKB1 542 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
RAB42P1-201ENST00000555078 CLUHO75153 1309 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 PDCD11Q14690 1871 aaKnown RBP13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 H0YCG3 227 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 K7ENM7 598 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 PODXLO00592 558 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 CLDN3O15551 220 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 ZMYND10O75800 440 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 FAM13AO94988 1023 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 TKTP29401 623 aaKnown RBP13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 UBALD2Q8IYN6 164 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 MYCT1Q8N699 235 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 DDX27Q96GQ7 796 aaKnown RBP13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 FIZ1Q96SL8 496 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 PARVGQ9HBI0 331 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 SRPRBQ9Y5M8 271 aaKnown RBP13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 CITO14578 2027 aa13.66□□□□□ -0.22
RAB42P1-201ENST00000555078 TRAK2O60296 914 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 PIGRP01833 764 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 CXCL8P10145 99 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 DDIT3P35638 169 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 CEBPZQ03701 1054 aaKnown RBP13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 RAB33AQ14088 237 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 RSPO2Q6UXX9 243 aaPredicted RBP13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 TMEM130Q8N3G9 435 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 FBXL6Q8N531 539 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 BICD1Q96G01 975 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 ZHX3Q9H4I2 956 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 PIDD1Q9HB75 910 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 TBX20Q9UMR3 447 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 KMT2EQ8IZD2 1858 aa13.65□□□□□ -0.22
RAB42P1-201ENST00000555078 TRAPPC3O43617 180 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 STX6O43752 255 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 FAM189A1O60320 539 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 C8AP07357 584 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 GBP2P32456 591 aaPredicted RBP13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 OR1D2P34982 312 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 TNFSF9P41273 254 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 MATR3P43243 847 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 LIG4P49917 911 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 SLC39A4Q6P5W5 647 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 ANKS3Q6ZW76 656 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 SUGP1Q8IWZ8 645 aaKnown RBP13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 STAMQ92783 540 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 MYADMQ96S97 322 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 KCNK12Q9HB15 430 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 BACE2Q9Y5Z0 518 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 MORC2Q9Y6X9 1032 aaPredicted RBP13.64□□□□□ -0.23
RAB42P1-201ENST00000555078 TTC26A0AVF1 554 aa13.63□□□□□ -0.23
RAB42P1-201ENST00000555078 HNRNPDLO14979 420 aaKnown RBP13.63□□□□□ -0.23
RAB42P1-201ENST00000555078 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
RAB42P1-201ENST00000555078 CLTAP09496 248 aa13.63□□□□□ -0.23
RAB42P1-201ENST00000555078 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAB42P1-201ENST00000555078 SCP2P22307 547 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms