RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ARHGEF17Q96PE2 2063 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ABCA9Q8IUA7 1624 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 A0A087X1B8 175 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 KRTAP29-1A8MX34 341 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 WNT10BO00744 389 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 DAPK3O43293 454 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 HOXA3O43365 443 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 RFPL1O75677 317 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ALDH1A2O94788 518 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 IL33O95760 270 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 SCGB1D2O95969 90 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 PEX11BO96011 259 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 PF4V1P10720 104 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 VCAM1P19320 739 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MAN2A2P49641 1150 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 NRG3P56975 720 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 NANOS3P60323 173 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CCT2P78371 535 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CNGB1Q14028 1251 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MAN2A1Q16706 1144 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 TMEM240Q5SV17 173 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 HTR3DQ70Z44 454 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MRGPREQ86SM8 312 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 XYLT1Q86Y38 959 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 VRK3Q8IV63 474 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CMTR2Q8IYT2 770 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ANKRD35Q8N283 1001 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MDGA1Q8NFP4 955 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF483Q8TF39 744 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 TSR2Q969E8 191 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 FATE1Q969F0 183 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ZG16BQ96DA0 208 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 HSPBAP1Q96EW2 488 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 SLC2A13Q96QE2 648 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CRAMP1Q96RY5 1269 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MLST8Q9BVC4 326 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 LSM14BQ9BX40 385 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ACE2Q9BYF1 805 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 RHOBTB2Q9BYZ6 727 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 OSBPL6Q9BZF3 934 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF768Q9H5H4 540 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 C14orf93Q9H972 538 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 TRPS1Q9UHF7 1281 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 NOB1Q9ULX3 412 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ARAP3Q8WWN8 1544 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 UHRF1BP1LA0JNW5 1464 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 POGZQ7Z3K3 1410 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 ZMYM3Q14202 1370 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 NDUFS2O75306 463 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 SEC24DO94855 1032 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-208ENST00000554785 MAKP20794 623 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 C5AR1P21730 350 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 NPEPPSP55786 919 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 FAM189BP81408 668 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 ANO4Q32M45 955 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 HSP90AB2PQ58FF8 381 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 RABL3Q5HYI8 236 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 FAM102BQ5T8I3 360 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 MBNL2Q5VZF2 373 aaKnown RBP1.98□□□□□ -2.09
PRPF39-208ENST00000554785 DPY19L2P1Q6NXN4 242 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 LMBR1LQ6UX01 489 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 GLB1L2Q8IW92 636 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 WDR75Q8IWA0 830 aaKnown RBP1.98□□□□□ -2.09
PRPF39-208ENST00000554785 MYO1HQ8N1T3 1032 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 LILRA3Q8N6C8 439 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-208ENST00000554785 PPM1NQ8N819 430 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.98□□□□□ -2.09
PRPF39-208ENST00000554785 GPR150Q8NGU9 434 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 TSPEARQ8WU66 669 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 VOPP1Q96AW1 172 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 UIMC1Q96RL1 719 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 ZBTB21Q9ULJ3 1066 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 PNMA8BQ9ULN7 279 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-208ENST00000554785 DMRT1Q9Y5R6 373 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 MYO3AQ8NEV4 1616 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 EFCAB5A4FU69 1503 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 CARMIL1Q5VZK9 1371 aa1.98□□□□□ -2.09
PRPF39-208ENST00000554785 A0A1W2PR48 441 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 AHRRA9YTQ3 701 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 LEFTY2O00292 366 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CYP27B1O15528 508 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 FSBPO95073 299 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ZRANB2O95218 330 aaKnown RBP eCLIP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ADH4P08319 380 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 U2AF1L5P0DN76 240 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CYP2C19P33261 490 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ADKP55263 362 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 U2AF1Q01081 240 aaKnown RBP eCLIP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 KIF23Q02241 960 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MGAT5Q09328 741 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MALLQ13021 153 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ADRM1Q16186 407 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MUM1L1Q5H9M0 696 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CCDC181Q5TID7 509 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ANKS6Q68DC2 871 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 NXNQ6DKJ4 435 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CXorf57Q6NSI4 855 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 BTNL9Q6UXG8 535 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ABHD15Q6UXT9 468 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 RHOUQ7L0Q8 258 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms