RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 GPBP1Q86WP2 473 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 PALB2Q86YC2 1186 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 TMEM105Q8N8V8 129 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 STAMQ92783 540 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 INTS4Q96HW7 963 aaKnown RBP17.22■□□□□ 0.35
GABRB3-207ENST00000554722 CLIC6Q96NY7 704 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 RHOBTB2Q9BYZ6 727 aa17.22■□□□□ 0.35
GABRB3-207ENST00000554722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.22■□□□□ 0.35
GABRB3-207ENST00000554722 FBXO2Q9UK22 296 aaPredicted RBP17.22■□□□□ 0.35
GABRB3-207ENST00000554722 NOTCH4Q99466 2003 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 GFRA3O60609 400 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 RFPL2O75678 378 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 BMP15O95972 392 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 C1RP00736 705 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 HARSP12081 509 aaKnown RBP17.21■□□□□ 0.35
GABRB3-207ENST00000554722 PDCP20941 246 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 FAM171A1Q5VUB5 890 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 CEP57Q86XR8 500 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 GPR65Q8IYL9 337 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 C3orf58Q8NDZ4 430 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 RAD54LQ92698 747 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 PLEKHA4Q9H4M7 779 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 KCNK12Q9HB15 430 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 KCND2Q9NZV8 630 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
GABRB3-207ENST00000554722 ADAM12O43184 909 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 SLC26A4O43511 780 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 TGM5O43548 720 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 MCF2P10911 925 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 CREMQ03060 361 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 UPP1Q16831 310 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 LILRA6Q6PI73 481 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
GABRB3-207ENST00000554722 SMG7Q92540 1137 aaKnown RBP17.2■□□□□ 0.34
GABRB3-207ENST00000554722 SNX27Q96L92 541 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 USP28Q96RU2 1077 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 FIZ1Q96SL8 496 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 CLSTN3Q9BQT9 956 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 TCHPQ9BT92 498 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 CCDC94Q9BW85 323 aaPredicted RBP17.2■□□□□ 0.34
GABRB3-207ENST00000554722 WDR6Q9NNW5 1121 aaKnown RBP17.2■□□□□ 0.34
GABRB3-207ENST00000554722 FNIP2Q9P278 1114 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 ANKFY1Q9P2R3 1169 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 FBXL21Q9UKT6 434 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 DUSP12Q9UNI6 340 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 WDR87Q6ZQQ6 2873 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 CLUHO75153 1309 aa17.2■□□□□ 0.34
GABRB3-207ENST00000554722 SF3B1O75533 1304 aaKnown RBP eCLIP17.2■□□□□ 0.34
GABRB3-207ENST00000554722 CFAP54Q96N23 3096 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 I3L4J1 428 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 GBP2P32456 591 aaPredicted RBP17.19■□□□□ 0.34
GABRB3-207ENST00000554722 BRCC3P46736 316 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 ZNF131P52739 623 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 STRN3Q13033 797 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 SLC10A6Q3KNW5 377 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 HAUS6Q7Z4H7 955 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
GABRB3-207ENST00000554722 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 ODF2LQ9ULJ1 636 aa17.19■□□□□ 0.34
GABRB3-207ENST00000554722 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
GABRB3-207ENST00000554722 PTPRZ1P23471 2315 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 RIF1Q5UIP0 2472 aaKnown RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 PROB1E7EW31 1015 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 TMEM189-UBE2V1I3L0A0 370 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 STX6O43752 255 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 TOM1L1O75674 476 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 B3GAT3O94766 335 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 TNFSF9P41273 254 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 SMTNP53814 917 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 YARSP54577 528 aaKnown RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 RSPO2Q6UXX9 243 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 PIK3R5Q8WYR1 880 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 LARP4BQ92615 738 aaKnown RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 ZNF707Q96C28 371 aaPredicted RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 PIDD1Q9HB75 910 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 ZDHHC7Q9NXF8 308 aa17.18■□□□□ 0.34
GABRB3-207ENST00000554722 LARSQ9P2J5 1176 aaKnown RBP17.18■□□□□ 0.34
GABRB3-207ENST00000554722 A0A087X0B3 334 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 N4BP1O75113 896 aaKnown RBP17.17■□□□□ 0.34
GABRB3-207ENST00000554722 FAM13AO94988 1023 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 AOC1P19801 751 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
GABRB3-207ENST00000554722 DDIT3P35638 169 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 SPAG1Q07617 926 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 MCL1Q07820 350 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 PSMD5Q16401 504 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 CWF19L1Q69YN2 538 aaKnown RBP17.17■□□□□ 0.34
GABRB3-207ENST00000554722 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
GABRB3-207ENST00000554722 ZPBP2Q6X784 338 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms