RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TRAF1Q13077 416 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ACVR2BQ13705 512 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 HLTFQ14527 1009 aaKnown RBP eCLIP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 LBRQ14739 615 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ODF1Q14990 250 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RAB3GAP1Q15042 981 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 KCNA10Q16322 511 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SETMARQ53H47 684 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ANKRD39Q53RE8 183 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RBM20Q5T481 1227 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NXNQ6DKJ4 435 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PDE12Q6L8Q7 609 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 BEND5Q7L4P6 421 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 HEATR4Q86WZ0 1026 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PEX5LQ8IYB4 626 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 USP38Q8NB14 1042 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RHPN1Q8TCX5 695 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CRELD1Q96HD1 420 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CEP295NLQ96MC4 621 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 GAS2L1Q99501 681 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NOC4LQ9BVI4 516 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TRIM7Q9C029 511 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ACAD9Q9H845 621 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CYP4F11Q9HBI6 524 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 KRT82Q9NSB4 513 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TMEM39AQ9NV64 488 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 DDX18Q9NVP1 670 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PSD3Q9NYI0 1048 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 MSRAQ9UJ68 235 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SSX2IPQ9Y2D8 614 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ANGPTL3Q9Y5C1 460 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ASTN1O14525 1302 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF532Q9HCE3 1301 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF536O15090 1300 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SLC35F4A4IF30 521 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SPTLC1O15269 473 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SURF6O75683 361 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 FLOT1O75955 427 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CXCL10P02778 98 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ZFYP08048 801 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 IMPDH2P12268 514 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 HOXD8P13378 290 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 EEF2P13639 858 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 FERP16591 822 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 EDNRBP24530 442 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 GUCY2CP25092 1073 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NRLP54845 237 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 GBE1Q04446 702 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NNTQ13423 1086 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 COL9A2Q14055 689 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NR6A1Q15406 480 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 LRRFIP1Q32MZ4 808 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ANKDD1AQ495B1 522 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 MMEL1Q495T6 779 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TM4SF20Q53R12 229 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NFRKBQ6P4R8 1299 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 GBP6Q6ZN66 633 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SLC41A1Q8IVJ1 513 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 FAM9CQ8IZT9 166 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 KRT222Q8N1A0 295 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 LCORLQ8N3X6 602 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC155Q8N6L0 562 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TMCO5AQ8N6Q1 288 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 LINC00469Q8N7U9 141 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NAXEQ8NCW5 288 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ALKBH8Q96BT7 664 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CLIP3Q96DZ5 547 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CNDP2Q96KP4 475 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SH3GL1Q99961 368 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TTPALQ9BTX7 342 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SLC26A6Q9BXS9 759 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RBCK1Q9BYM8 510 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ANTXR1Q9H6X2 564 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 BRD9Q9H8M2 597 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 FBRSQ9HAH7 460 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TRPV5Q9NQA5 729 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TCF7L2Q9NQB0 619 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NPDC1Q9NQX5 325 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TOMM22Q9NS69 142 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TCP11L1Q9NUJ3 509 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF624Q9P2J8 865 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 WDR35Q9P2L0 1181 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 MTRRQ9UBK8 725 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SH3BGRL2Q9UJC5 107 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RIMKLBQ9ULI2 386 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 EDARQ9UNE0 448 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CRYL1Q9Y2S2 319 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 GRIN2DO15399 1336 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FRMPD2Q68DX3 1309 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 C17orf113A0A1B0GUU1 675 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 RRN3P2A6NIE6 340 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LRRC10BA6NIK2 292 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TBKBP1A7MCY6 615 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TISP43B9A030 160 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 B9A039 149 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CLASP2O75122 1294 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZBED4O75132 1171 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SKAP2O75563 359 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SNX4O95219 450 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms