RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 PAPLNO95428 1278 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 RAD51AP2Q09MP3 1159 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 KARSQ15046 597 aaKnown RBP11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 CYP26C1Q6V0L0 522 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 C15orf39Q6ZRI6 1047 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 TAS1R1Q7RTX1 841 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 GPBP1Q86WP2 473 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 CMASQ8NFW8 434 aaPredicted RBP11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 LRRC15Q8TF66 581 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 PTCD2Q8WV60 388 aaKnown RBP11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 LARP4BQ92615 738 aaKnown RBP11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 PAAF1Q9BRP4 392 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 PARVGQ9HBI0 331 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 SLC38A7Q9NVC3 462 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 STK17AQ9UEE5 414 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 CLIC4Q9Y696 253 aa11.4□□□□□ -0.58
PTCD2P1-201ENST00000554393 MYO10Q9HD67 2058 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZFHX4Q86UP3 3567 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 CASTOR2A6NHX0 329 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 C2CD2LO14523 706 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 FAM13AO94988 1023 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 GLUD1P00367 558 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 PIGRP01833 764 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 KCNE1P15382 129 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 DDIT3P35638 169 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 TXLNAP40222 546 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 MCL1Q07820 350 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 MCM6Q14566 821 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 NOLC1Q14978 699 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 SLC39A14Q15043 492 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 KYAT1Q16773 422 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 ATAT1Q5SQI0 421 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 RARS2Q5T160 578 aaKnown RBP11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 PDXDC1Q6P996 788 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 HAUS6Q7Z4H7 955 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 GPR149Q86SP6 731 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 HSCBQ8IWL3 235 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 CEP120Q8N960 986 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 RPGRIP1Q96KN7 1286 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 TCHPQ9BT92 498 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 TTPALQ9BTX7 342 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 PLEKHA4Q9H4M7 779 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 POMKQ9H5K3 350 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 MUTYHQ9UIF7 546 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZNF318Q5VUA4 2279 aa11.39□□□□□ -0.59
PTCD2P1-201ENST00000554393 ANK1P16157 1881 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 TRIOO75962 3097 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 NPHP3-ACAD11A0A0J9YXS1 232 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 CLDN3O15551 220 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 KRT18P05783 430 aaKnown RBP11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 MARCKSP29966 332 aaPredicted RBP11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 NASPP49321 788 aaPredicted RBP11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 UPP1Q16831 310 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 GLRA4Q5JXX5 417 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 RTP2Q5QGT7 225 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 FAM173BQ6P4H8 233 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZBTB33Q86T24 672 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 RIN2Q8WYP3 895 aaPredicted RBP11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 EDAQ92838 391 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 EPSTI1Q96J88 318 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 USP28Q96RU2 1077 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 CXCL16Q9H2A7 254 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 MAN1C1Q9NR34 630 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 ANKFY1Q9P2R3 1169 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 TBX20Q9UMR3 447 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 DOCK8Q8NF50 2099 aa11.38□□□□□ -0.59
PTCD2P1-201ENST00000554393 K7ENM7 598 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 TRAPPC3O43617 180 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 TRAK2O60296 914 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 B3GAT3O94766 335 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 FGFR3P22607 806 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 OSTNP61366 133 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 DHX8Q14562 1220 aaKnown RBP11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 FAM171A1Q5VUB5 890 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 RRAGBQ5VZM2 374 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 TMC5Q6UXY8 1006 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 CCDC73Q6ZRK6 1079 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 USP49Q70CQ1 688 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZDHHC14Q8IZN3 488 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 MYCT1Q8N699 235 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 C12orf76Q8N812 135 aaPredicted RBP11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 RABGGTAQ92696 567 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms