RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 RRP12Q5JTH9 1297 aaKnown RBP6.33□□□□□ -1.4
ATXN3-225ENST00000554214 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-225ENST00000554214 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-225ENST00000554214 MRI1Q9BV20 369 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 TEX101Q9BY14 249 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 LANCL2Q9NS86 450 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 INTUQ9ULD6 942 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 PCF11O94913 1555 aaKnown RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 DIRC3C9JPN6 131 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 ZNF185O15231 689 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 MT-CO1P00395 513 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 RAP2AP10114 183 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 MYBL2P10244 700 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 ZSCAN20P17040 1043 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 SLC6A9P48067 706 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 CHN2P52757 468 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 MTMR1Q13613 665 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 FAM50AQ14320 339 aaKnown RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 ACAP2Q15057 778 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 RHOUQ7L0Q8 258 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 PRPF38AQ8NAV1 312 aaKnown RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 OR2I1PQ8NGU4 316 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 CCHCR1Q8TD31 782 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 JADE3Q92613 823 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 CHFRQ96EP1 664 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 CYFIP2Q96F07 1278 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 AKIP1Q9NQ31 210 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 TRHDEQ9UKU6 1024 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 CHST2Q9Y4C5 530 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 WDR7Q9Y4E6 1490 aa6.32□□□□□ -1.4
ATXN3-225ENST00000554214 RIMS1Q86UR5 1692 aaKnown RBP6.32□□□□□ -1.4
ATXN3-225ENST00000554214 CARMIL1Q5VZK9 1371 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 ARID4BQ4LE39 1312 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-225ENST00000554214 KLHL33A6NCF5 533 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 FAM171A2A8MVW0 826 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 PPFIA4O75335 1185 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 KATNA1O75449 491 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 NCR1O76036 304 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 NDUFA10O95299 355 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 ABHD16AO95870 558 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 GUCY1A2P33402 732 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 PTPAQ15257 358 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 PDCD4Q53EL6 469 aaKnown RBP6.31□□□□□ -1.4
ATXN3-225ENST00000554214 LY6G5CQ5SRR4 150 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-225ENST00000554214 METRNLQ641Q3 311 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 MED25Q71SY5 747 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 SSH1Q8WYL5 1049 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 MYEOVQ96EZ4 313 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 CEP89Q96ST8 783 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 C7orf25Q9BPX7 421 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 USP15Q9Y4E8 981 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-225ENST00000554214 ACTL7AQ9Y615 435 aa6.31□□□□□ -1.4
ATXN3-225ENST00000554214 CFAP43Q8NDM7 1665 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 NDUFS2O75306 463 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 POMCP01189 267 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 ATP5JP18859 108 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 FPR1P21462 350 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 INHBCP55103 352 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 KCNV1Q6PIU1 500 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 Q6ZPA2 131 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 RPUSD2Q8IZ73 545 aaKnown RBP6.3□□□□□ -1.4
ATXN3-225ENST00000554214 MTMR8Q96EF0 704 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PRRX2Q99811 253 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 IKZF4Q9H2S9 585 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 MANSC1Q9H8J5 431 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PCDHGA9Q9Y5G4 932 aaKnown RBP6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PCDHGA7Q9Y5G6 932 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PCDHGA6Q9Y5G7 932 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 KIF27Q86VH2 1401 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 BCORL1Q5H9F3 1711 aa6.3□□□□□ -1.4
ATXN3-225ENST00000554214 WDR33Q9C0J8 1336 aaKnown RBP6.29□□□□□ -1.4
ATXN3-225ENST00000554214 KIAA0556O60303 1618 aa6.29□□□□□ -1.4
ATXN3-225ENST00000554214 A0A087X1B8 175 aa6.29□□□□□ -1.4
ATXN3-225ENST00000554214 TMEM191CA6NGB0 347 aa6.29□□□□□ -1.4
ATXN3-225ENST00000554214 ALG1L2C9J202 215 aa6.29□□□□□ -1.4
ATXN3-225ENST00000554214 AMY1AP04745 511 aa6.29□□□□□ -1.4
ATXN3-225ENST00000554214 SPATA31D3P0C874 917 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms