RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SF3B1O75533 1304 aaKnown RBP eCLIP22.23■■□□□ 1.15
FOXA1-203ENST00000553751 TMEM189-UBE2V1I3L0A0 370 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 C2CD2LO14523 706 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 OGTO15294 1046 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 MBTPS2O43462 519 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 TADA2AO75478 443 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 SRGAP2BP0DMP2 458 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 PFKFB1P16118 471 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 CLCNKBP51801 687 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 ASIC1P78348 528 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 KYAT1Q16773 422 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 UPP1Q16831 310 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 KLHL5Q96PQ7 755 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 PYM1Q9BRP8 204 aaKnown RBP22.22■■□□□ 1.15
FOXA1-203ENST00000553751 SLC38A7Q9NVC3 462 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 HPSEQ9Y251 543 aa22.22■■□□□ 1.15
FOXA1-203ENST00000553751 A0A1B0GVL5 298 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 TTC26A0AVF1 554 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 ACTN4O43707 911 aaKnown RBP22.21■■□□□ 1.15
FOXA1-203ENST00000553751 CNPP09543 421 aaKnown RBP22.21■■□□□ 1.15
FOXA1-203ENST00000553751 IGFBP6P24592 240 aaPredicted RBP22.21■■□□□ 1.15
FOXA1-203ENST00000553751 NUCB2P80303 420 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 ALCAMQ13740 583 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 ENOX2Q16206 610 aaKnown RBP22.21■■□□□ 1.15
FOXA1-203ENST00000553751 USP41Q3LFD5 358 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 ANKRD54Q6NXT1 300 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 CD300LGQ6UXG3 332 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 C3orf58Q8NDZ4 430 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 CASP10Q92851 521 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 HPS3Q969F9 1004 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 C18orf25Q96B23 403 aaPredicted RBP22.21■■□□□ 1.15
FOXA1-203ENST00000553751 ACCSQ96QU6 501 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 EMILIN2Q9BXX0 1053 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 PLEKHA5Q9HAU0 1116 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 SSX2IPQ9Y2D8 614 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 PCDHB13Q9Y5F0 798 aa22.21■■□□□ 1.15
FOXA1-203ENST00000553751 CASP1P29466 404 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 ADSSP30520 456 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 SMAD2Q15796 467 aaKnown RBP22.2■■□□□ 1.14
FOXA1-203ENST00000553751 RTP2Q5QGT7 225 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 SLFN12LQ6IEE8 588 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 KIAA1841Q6NSI8 718 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 DCLRE1AQ6PJP8 1040 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 GPR65Q8IYL9 337 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 TMEM87AQ8NBN3 555 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 GLIS3Q8NEA6 775 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 SLC22A17Q8WUG5 538 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 BLZF1Q9H2G9 400 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 RXFP1Q9HBX9 757 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 GDPD2Q9HCC8 539 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 SERTAD1Q9UHV2 236 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 CPSF3Q9UKF6 684 aaKnown RBP22.2■■□□□ 1.14
FOXA1-203ENST00000553751 EXOC7Q9UPT5 735 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 FAM50BQ9Y247 325 aa22.2■■□□□ 1.14
FOXA1-203ENST00000553751 FAM237AA0A1B0GTK4 181 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 TEX28O15482 410 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 B3GAT3O94766 335 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 ADRB2P07550 413 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 SLFN14P0C7P3 912 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 EPCAMP16422 314 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 CLCN4P51793 760 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 PPP2R3AQ06190 1150 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 EHHADHQ08426 723 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 SYCE2Q6PIF2 218 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 GRAMD1CQ8IYS0 662 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 CEP57L1Q8IYX8 460 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 TUBGCP4Q9UGJ1 667 aa22.19■■□□□ 1.14
FOXA1-203ENST00000553751 VWA8A3KMH1 1905 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 A0A1W2PQ27 194 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 A0A1W2PQ64 194 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 A0A1W2PQD8 194 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 LACTBL1A8MY62 500 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 PODXLO00592 558 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 AFMP43652 599 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 SPAG1Q07617 926 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 ELAVL2Q12926 359 aaKnown RBP22.18■■□□□ 1.14
FOXA1-203ENST00000553751 CUL4BQ13620 913 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 FAM171A1Q5VUB5 890 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 UNC13DQ70J99 1090 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 PPFIBP1Q86W92 1011 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 RIN2Q8WYP3 895 aaPredicted RBP22.18■■□□□ 1.14
FOXA1-203ENST00000553751 DDX27Q96GQ7 796 aaKnown RBP22.18■■□□□ 1.14
FOXA1-203ENST00000553751 TTPALQ9BTX7 342 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 S1PR5Q9H228 398 aa22.18■■□□□ 1.14
FOXA1-203ENST00000553751 RPF1Q9H9Y2 349 aaKnown RBP22.18■■□□□ 1.14
FOXA1-203ENST00000553751 AGO2Q9UKV8 859 aaKnown RBP22.18■■□□□ 1.14
FOXA1-203ENST00000553751 USP15Q9Y4E8 981 aaPredicted RBP22.18■■□□□ 1.14
FOXA1-203ENST00000553751 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.17■■□□□ 1.14
FOXA1-203ENST00000553751 PRPF6O94906 941 aaKnown RBP22.17■■□□□ 1.14
FOXA1-203ENST00000553751 HOXB8P17481 243 aaPredicted RBP22.17■■□□□ 1.14
FOXA1-203ENST00000553751 KLRC2P26717 231 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 ACOT2P49753 483 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 FAM26FQ5R3K3 315 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 TMEM130Q8N3G9 435 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 POMGNT1Q8WZA1 660 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 KIF12Q96FN5 646 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 TMEM206Q9H813 350 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.17■■□□□ 1.14
FOXA1-203ENST00000553751 DZANK1Q9NVP4 752 aa22.17■■□□□ 1.14
FOXA1-203ENST00000553751 C5orf42Q9H799 3197 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms