RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CNNM4Q6P4Q7 775 aa17.51■□□□□ 0.39
ACTN1-209ENST00000553659 RNF149Q8NC42 400 aa17.51■□□□□ 0.39
ACTN1-209ENST00000553659 LXNQ9BS40 222 aa17.51■□□□□ 0.39
ACTN1-209ENST00000553659 HSD3B7Q9H2F3 369 aa17.51■□□□□ 0.39
ACTN1-209ENST00000553659 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
ACTN1-209ENST00000553659 PCDHA12Q9UN75 941 aa17.51■□□□□ 0.39
ACTN1-209ENST00000553659 SSX2IPQ9Y2D8 614 aa17.51■□□□□ 0.39
ACTN1-209ENST00000553659 PP2D1A8MPX8 630 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 PPP1R3GB7ZBB8 358 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 SOD2P04179 222 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 ITGA4P13612 1032 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 AXLP30530 894 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 PAK1Q13153 545 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 TDGQ13569 410 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 EMC2Q15006 297 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 PCBP1Q15365 356 aaKnown RBP eCLIP17.5■□□□□ 0.39
ACTN1-209ENST00000553659 TPD52L1Q16890 204 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-209ENST00000553659 FILIP1LQ4L180 1135 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 XKR9Q5GH70 373 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 COLGALT2Q8IYK4 626 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 SMG8Q8ND04 991 aaKnown RBP17.5■□□□□ 0.39
ACTN1-209ENST00000553659 CMASQ8NFW8 434 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-209ENST00000553659 KIAA1524Q8TCG1 905 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 SNX29Q8TEQ0 813 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 NOC3LQ8WTT2 800 aaKnown RBP17.5■□□□□ 0.39
ACTN1-209ENST00000553659 MTRQ99707 1265 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 BLZF1Q9H2G9 400 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 ZSWIM4Q9H7M6 989 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-209ENST00000553659 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 RGL1Q9NZL6 768 aa17.5■□□□□ 0.39
ACTN1-209ENST00000553659 PVALEFA0A1B0GWK0 134 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 INPPL1O15357 1258 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 ERLIN2O94905 339 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 URODP06132 367 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 CDC25AP30304 524 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 NBL1P41271 181 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 MXD4Q14582 209 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-209ENST00000553659 TMEM119Q4V9L6 283 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 LARP4BQ92615 738 aaKnown RBP17.49■□□□□ 0.39
ACTN1-209ENST00000553659 DYDC2Q96IM9 177 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 RPS6KC1Q96S38 1066 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 MMTAG2Q9BU76 263 aaKnown RBP17.49■□□□□ 0.39
ACTN1-209ENST00000553659 HERC2P3Q9BVR0 1158 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 TRIM9Q9C026 710 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 KCNF1Q9H3M0 494 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 KCNK12Q9HB15 430 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 EXOC1Q9NV70 894 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 IPPQ9Y573 584 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 USP34Q70CQ2 3546 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 DOCK8Q8NF50 2099 aa17.49■□□□□ 0.39
ACTN1-209ENST00000553659 BICDL2A1A5D9 508 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 C2CD2LO14523 706 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 PSMA7O14818 248 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 ZBTB39O15060 712 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 EFEMP2O95967 443 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 ADH1AP07327 375 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 PTENP60484 403 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 SPIRE1Q08AE8 756 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 NCBP1Q09161 790 aaKnown RBP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 CTTNQ14247 550 aaKnown RBP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 KIAA0319Q5VV43 1072 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 NCAPH2Q6IBW4 605 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 NOTUMQ6P988 496 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 TAS1R1Q7RTX1 841 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 TMC6Q7Z403 805 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 RNF168Q8IYW5 571 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 RAD54LQ92698 747 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 DHTKD1Q96HY7 919 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 GAD1Q99259 594 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 RHOBTB2Q9BYZ6 727 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 MAN1C1Q9NR34 630 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 IGSF9Q9P2J2 1179 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 DPP7Q9UHL4 492 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 DUSP12Q9UNI6 340 aa17.48■□□□□ 0.39
ACTN1-209ENST00000553659 PRG3Q9Y2Y8 225 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-209ENST00000553659 PTPRZ1P23471 2315 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-209ENST00000553659 CCDC195A0A1B0GUA6 201 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ARL5CA6NH57 179 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 TEX28O15482 410 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 KLRC4O43908 158 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 TSPAN1O60635 241 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 SLITRK3O94933 977 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ATP1A3P13637 1013 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 NPR3P17342 541 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 OR1G1P47890 313 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 GLUD2P49448 558 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ASIC1P78348 528 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 POU5F1BQ06416 359 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 DSC1Q08554 894 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 PSMD2Q13200 908 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 TFDP1Q14186 410 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 KMT5BQ4FZB7 885 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms