RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 AJAP1Q9UKB5 411 aaPredicted RBP4.69□□□□□ -1.66
TDP1-207ENST00000553617 PCDHA6Q9UN73 950 aa4.69□□□□□ -1.66
TDP1-207ENST00000553617 LZTS1Q9Y250 596 aa4.69□□□□□ -1.66
TDP1-207ENST00000553617 GPR52Q9Y2T5 361 aa4.69□□□□□ -1.66
TDP1-207ENST00000553617 MED16Q9Y2X0 877 aa4.69□□□□□ -1.66
TDP1-207ENST00000553617 CTDP1Q9Y5B0 961 aaPredicted RBP4.69□□□□□ -1.66
TDP1-207ENST00000553617 PCDHA1Q9Y5I3 950 aa4.69□□□□□ -1.66
TDP1-207ENST00000553617 ATRNL1Q5VV63 1379 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 hCG_1642624A0A1W2PR95 340 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 C2orf78A6NCI8 922 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 APOL1O14791 398 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 DAPK3O43293 454 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 ITGA10O75578 1167 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 CYP7B1O75881 506 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 MATN4O95460 622 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 HMGCRP04035 888 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 PARP1P09874 1014 aaKnown RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 HARSP12081 509 aaKnown RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 ZNF28P17035 718 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 TECP42680 631 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 KIR2DL3P43628 341 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 CCT5P48643 541 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 HSPA7P48741 367 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 KCNQ1P51787 676 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 FOXO4P98177 505 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 ICA1Q05084 483 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 ALFQ53S48 1182 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 CIAPIN1Q6FI81 312 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 LARP4Q71RC2 724 aaKnown RBP eCLIP4.68□□□□□ -1.66
TDP1-207ENST00000553617 ZNF572Q7Z3I7 529 aaPredicted RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 PLA2G15Q8NCC3 412 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 REPS2Q8NFH8 660 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 MZB1Q8WU39 189 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 NAP1L5Q96NT1 182 aaPredicted RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 UHRF1Q96T88 793 aaPredicted RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 BRIP1Q9BX63 1249 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 SENP6Q9GZR1 1112 aaPredicted RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 SMURF2Q9HAU4 748 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 KCNK12Q9HB15 430 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 TMEM140Q9NV12 185 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 SIRT5Q9NXA8 310 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 SIDT1Q9NXL6 827 aaKnown RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 ING3Q9NXR8 418 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 MYO1AQ9UBC5 1043 aa4.68□□□□□ -1.66
TDP1-207ENST00000553617 AFF4Q9UHB7 1163 aaKnown RBP4.68□□□□□ -1.66
TDP1-207ENST00000553617 SETD1BQ9UPS6 1966 aaKnown RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 TEX51A0A1B0GUA7 166 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 TRIM43BA6NCK2 446 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 ZNF503-AS2A6NEH8 195 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 AHSGP02765 367 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 THP07101 528 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 GYPEP15421 78 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 ALOX15P16050 662 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 ITGB5P18084 799 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 SMARCA1P28370 1054 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 PDIA3P30101 505 aaKnown RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 ZEB1P37275 1124 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 IRAK1P51617 712 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 MAPK10P53779 464 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 SOX8P57073 446 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 ADAM8P78325 824 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 SETQ01105 290 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 SP140Q13342 867 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 ADAM15Q13444 863 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 BIRC3Q13489 604 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 BLMHQ13867 455 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 PCOLCEQ15113 449 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 PUM3Q15397 648 aaKnown RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 KCNMB1Q16558 191 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 PRAMEF14Q5SWL7 426 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 KLHDC7AQ5VTJ3 777 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 TRMT10BQ6PF06 316 aaKnown RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 PLXDC1Q8IUK5 500 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 SYTL1Q8IYJ3 562 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 CCDC33Q8N5R6 958 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 MYCT1Q8N699 235 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 GIMAP8Q8ND71 665 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 NUDT10Q8NFP7 164 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 CCT6BQ92526 530 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 TRIM43Q96BQ3 446 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 ZBTB8AQ96BR9 441 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 NUDT11Q96G61 164 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 LIN37Q96GY3 246 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 P2RX7Q99572 595 aaKnown RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 STK33Q9BYT3 514 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 MCOLN1Q9GZU1 580 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 CNNM1Q9NRU3 951 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 RGS17Q9UGC6 210 aaPredicted RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 ACTL7AQ9Y615 435 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 OAS3Q9Y6K5 1087 aaKnown RBP4.67□□□□□ -1.66
TDP1-207ENST00000553617 KAT6BQ8WYB5 2073 aa4.67□□□□□ -1.66
TDP1-207ENST00000553617 PRSS29PA6NIE9 313 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 PLA2G6O60733 806 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 CSTBP04080 98 aaKnown RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 CD1AP06126 327 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 SRGNP10124 158 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 IL2RBP14784 551 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 VEGFAP15692 232 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms