RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ZCCHC14Q8WYQ9 949 aaKnown RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 ZBTB8AQ96BR9 441 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 SUCLG2Q96I99 432 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 UHRF1Q96T88 793 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 SPATA25Q9BR10 227 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 CRB3Q9BUF7 120 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 VPS11Q9H270 941 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 SARS2Q9NP81 518 aaKnown RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 GPRC5DQ9NZD1 345 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 OGDHLQ9ULD0 1010 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 MORC2Q9Y6X9 1032 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 C2orf78A6NCI8 922 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 NT5C1B-RDH14C9J2C7 533 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 NCK2O43639 380 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 SH3BP5O60239 455 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 FGF18O76093 207 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 IL18RAPO95256 599 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 HMGCRP04035 888 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 KITP10721 976 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 NPR1P16066 1061 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 SLC7A1P30825 629 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 GUCY1A2P33402 732 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 PPM1AP35813 382 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 IL6STP40189 918 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 KIR2DL3P43628 341 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 CTXN1P60606 82 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 CAP1Q01518 475 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 SMAD4Q13485 552 aaKnown RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 FLYWCH1Q4VC44 716 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 FAM9AQ8IZU1 332 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 NKAPQ8N5F7 415 aaKnown RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 PNISRQ8TF01 805 aaKnown RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 MSLNLQ96KJ4 702 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 MRGPRX1Q96LB2 322 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 COLEC11Q9BWP8 271 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 MAF1Q9H063 256 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 CERS4Q9HA82 394 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 LANCL2Q9NS86 450 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 PIH1D1Q9NWS0 290 aaKnown RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 ING3Q9NXR8 418 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 GPRC5BQ9NZH0 403 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 LUZP4Q9P127 313 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 FEZ2Q9UHY8 353 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-209ENST00000553280 CPA4Q9UI42 421 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 PCDHA1Q9Y5I3 950 aa6.15□□□□□ -1.42
SCFD1-209ENST00000553280 POM121BA6NF01 834 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 ADCY6O43306 1168 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 GPR32O75388 356 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 ABCB4P21439 1286 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 PRDX5P30044 214 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 PPM1FP49593 454 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 ADAM15Q13444 863 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 MTM1Q13496 603 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 TRIM14Q14142 442 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 KHDC1LQ5JSQ8 128 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 DACT2Q5SW24 774 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 LARP4Q71RC2 724 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 SESTD1Q86VW0 696 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 PPP1R3BQ86XI6 285 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 FAM90A1Q86YD7 464 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 RTKN2Q8IZC4 609 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 CPXCR1Q8N123 301 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 ATXN2LQ8WWM7 1075 aaKnown RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 CASKIN2Q8WXE0 1202 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 LPPQ93052 612 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 KIAA1191Q96A73 305 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 SENP6Q9GZR1 1112 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 KATNBL1Q9H079 304 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 MRPL46Q9H2W6 279 aaKnown RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 LDAHQ9H6V9 325 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 PNPLA8Q9NP80 782 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 CNNM1Q9NRU3 951 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 TMEM140Q9NV12 185 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 GNL3LQ9NVN8 582 aaKnown RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 PCDHA6Q9UN73 950 aa6.14□□□□□ -1.43
SCFD1-209ENST00000553280 CTDP1Q9Y5B0 961 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-209ENST00000553280 F2RL2O00254 374 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 MTSS1O43312 755 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 ITGA10O75578 1167 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 IL2RBP14784 551 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 BRAFP15056 766 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 GYPEP15421 78 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 TSHRP16473 764 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 ZNF28P17035 718 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 EN2P19622 333 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 PCSK1P29120 753 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 MEOX1P50221 254 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 ARFIP2P53365 341 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 SUMO3P55854 103 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 POU5F1BQ06416 359 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 DLX2Q07687 328 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 DAG1Q14118 895 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 PCOLCEQ15113 449 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 RALBP1Q15311 655 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 PDCD2Q16342 344 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 ZNF827Q17R98 1081 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 TUBB8Q3ZCM7 444 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms