RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SNW1Q13573 536 aaKnown RBP12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CUL4BQ13620 913 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CAPSQ13938 189 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 UNC13DQ70J99 1090 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CATSPER4Q7RTX7 472 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 SFR1Q86XK3 245 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 ZNF280BQ86YH2 543 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 ENGASEQ8NFI3 743 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 LRRC15Q8TF66 581 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.41
TMEM116-218ENST00000552839 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 BICD1Q96G01 975 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 C7orf25Q9BPX7 421 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 GBP3Q9H0R5 595 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CLSTN2Q9H4D0 955 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 POLD4Q9HCU8 107 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 TBC1D7Q9P0N9 293 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 SEL1LQ9UBV2 794 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 INPP5FQ9Y2H2 1132 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
TMEM116-218ENST00000552839 A0A087WZ62 844 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 SLC16A4O15374 487 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 TRAK2O60296 914 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 LILRB3O75022 631 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 KIF20AO95235 890 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 GCNT3O95395 438 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 RPN1P04843 607 aaKnown RBP12.45□□□□□ -0.42
TMEM116-218ENST00000552839 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 GLRA2P23416 452 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 CASP1P29466 404 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 ARL2P36404 184 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.421e-8■□□□□ 9.6
TMEM116-218ENST00000552839 EFNA5P52803 228 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 RNASELQ05823 741 aaKnown RBP12.45□□□□□ -0.42
TMEM116-218ENST00000552839 ARSHQ5FYA8 562 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 FAM26FQ5R3K3 315 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
TMEM116-218ENST00000552839 GLB1LQ6UWU2 654 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 DGLUCYQ7Z3D6 616 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 FDXACB1Q9BRP7 624 aaPredicted RBP12.45□□□□□ -0.42
TMEM116-218ENST00000552839 EMILIN2Q9BXX0 1053 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 FAM105AQ9NUU6 356 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 CA14Q9ULX7 337 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 DOCK6Q96HP0 2047 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 CACNA1IQ9P0X4 2223 aa12.45□□□□□ -0.42
TMEM116-218ENST00000552839 PVALEFA0A1B0GWK0 134 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 ZNF623O75123 536 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 DDHD2O94830 711 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 PRKCBP05771 671 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 SKIP12755 728 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 GBP2P32456 591 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-218ENST00000552839 NPTX2P47972 431 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 STIM1Q13586 685 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 ALCAMQ13740 583 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 NFKBIBQ15653 356 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 MAPK6Q16659 721 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
TMEM116-218ENST00000552839 APBB1IPQ7Z5R6 666 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-218ENST00000552839 SRGAP1Q7Z6B7 1085 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 SLC44A3Q8N4M1 653 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 GPT2Q8TD30 523 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 KIFC3Q9BVG8 833 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
TMEM116-218ENST00000552839 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 MAN1C1Q9NR34 630 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 PRMT7Q9NVM4 692 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-218ENST00000552839 EXOC7Q9UPT5 735 aa12.44□□□□□ -0.42
TMEM116-218ENST00000552839 PIN4Q9Y237 131 aaKnown RBP12.44□□□□□ -0.42
TMEM116-218ENST00000552839 MIA3Q5JRA6 1907 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 CCDC195A0A1B0GUA6 201 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 K7ERI5 159 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 C2CD2LO14523 706 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 DCNP07585 359 aaKnown RBP12.43□□□□□ -0.42
TMEM116-218ENST00000552839 MYBP10242 640 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 SCP2P22307 547 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 AFF1P51825 1210 aaKnown RBP12.43□□□□□ -0.42
TMEM116-218ENST00000552839 DPYDQ12882 1025 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 MAPK7Q13164 816 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 PUM1Q14671 1186 aaKnown RBP eCLIP12.43□□□□□ -0.42
TMEM116-218ENST00000552839 KLHL40Q2TBA0 621 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 KMT5BQ4FZB7 885 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 AGMOQ6ZNB7 445 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 CMASQ8NFW8 434 aaPredicted RBP12.43□□□□□ -0.42
TMEM116-218ENST00000552839 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 BSNDQ8WZ55 320 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 DNAJC19Q96DA6 116 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 MYADMQ96S97 322 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 WDR6Q9NNW5 1121 aaKnown RBP12.43□□□□□ -0.42
TMEM116-218ENST00000552839 MRPL17Q9NRX2 175 aaKnown RBP12.43□□□□□ -0.42
TMEM116-218ENST00000552839 DLGAP2Q9P1A6 1054 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
TMEM116-218ENST00000552839 TDRD15B5MCY1 1934 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms