RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MAF1Q9H063 256 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 RIOX1Q9H6W3 641 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 IGSF5Q9NSI5 407 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 ADAMTS5Q9UNA0 930 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 EMC9Q9Y3B6 208 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 BACE2Q9Y5Z0 518 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 STK36Q9NRP7 1315 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 B2RBV5 119 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 BTBD19C9JJ37 291 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 TMEM232C9JQI7 657 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 PDHXO00330 501 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 VWA5AO00534 786 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 ABLIM1O14639 778 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 CPLX1O14810 134 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 ATP2A1O14983 1001 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 FLOT1O75955 427 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 KCNH1O95259 989 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 ANP32AP39687 249 aaKnown RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 SEPHS1P49903 392 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 ZNF143P52747 638 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 IRX3P78415 501 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 KIF23Q02241 960 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 CUL4AQ13619 759 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 CBX2Q14781 532 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 NTRK3Q16288 839 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 ZNF385BQ569K4 471 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 SYDE2Q5VT97 1194 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 RPTNQ6XPR3 784 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 KCTD1Q719H9 257 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 HSCBQ8IWL3 235 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 BVESQ8NE79 360 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 MTMR8Q96EF0 704 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 RRP36Q96EU6 259 aaKnown RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 TMX3Q96JJ7 454 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 C20orf173Q96LM9 149 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 NUP88Q99567 741 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 PTPN18Q99952 460 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 MYL10Q9BUA6 226 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 LGR4Q9BXB1 951 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 RNF26Q9BY78 433 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 PDLIM7Q9NR12 457 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 NAP1L2Q9ULW6 460 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-213ENST00000550629 KIF3AQ9Y496 699 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 MYH4Q9Y623 1939 aa6.6□□□□□ -1.35
SCAF11-213ENST00000550629 FRMPD2Q68DX3 1309 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 PTPRFP10586 1907 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 hCG_1984214I3L0E3 225 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 ZBTB5O15062 677 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 PRPF3O43395 683 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 CA12O43570 354 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 ZBED4O75132 1171 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 PLEKHA8P1O95397 391 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 GOLGA8HP0CJ92 632 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 RXRAP19793 462 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 TACR1P25103 407 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 COPB2P35606 906 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 EPHB3P54753 998 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 HERVK_113P62684 666 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 HMGN5P82970 282 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 TMEM62Q0P6H9 643 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 SCRN1Q12765 414 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 IKQ13123 557 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 OLFML2BQ68BL8 750 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 TMC6Q7Z403 805 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 MCF2L2Q86YR7 1114 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 FAM178BQ8IXR5 827 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 ADGRF4Q8IZF3 695 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 FAM43AQ8N2R8 423 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 SRBD1Q8N5C6 995 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 ZNF713Q8N859 430 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 MICAL1Q8TDZ2 1067 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 SMCR8Q8TEV9 937 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 WASF1Q92558 559 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 TEX13BQ9BXU2 312 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 RANBP17Q9H2T7 1088 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 JMJD4Q9H9V9 463 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 SLC38A10Q9HBR0 1119 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 NCOA5Q9HCD5 579 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 SAGE1Q9NXZ1 904 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 MORF4L1Q9UBU8 362 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 SEC63Q9UGP8 760 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 ISY1Q9ULR0 285 aaKnown RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 RABGAP1Q9Y3P9 1069 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 KCTD3Q9Y597 815 aa6.59□□□□□ -1.35
SCAF11-213ENST00000550629 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-213ENST00000550629 A0A0G2JMZ2 1700 aa6.59□□□□□ -1.36
SCAF11-213ENST00000550629 ADGRA2Q96PE1 1338 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 A0A1W2PQJ5 194 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CYTH3O43739 400 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 DEXIO95424 95 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 LARGE1O95461 756 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 ICAM1P05362 532 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 DBHP09172 617 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 NAT2P11245 290 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 SLC16A2P36021 539 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CDR1P51861 262 aa6.58□□□□□ -1.36
SCAF11-213ENST00000550629 CORO7P57737 925 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms