RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SMIM28A0A1B0GU29 152 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 TRAPPC3O43617 180 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 DCNP07585 359 aaKnown RBP23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 GRM5P41594 1212 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 NPTX2P47972 431 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 TOB1P50616 345 aaPredicted RBP23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 STARD6P59095 220 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 ALKAL1Q6UXT8 129 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 DAW1Q8N136 415 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 ADSSL1Q8N142 457 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 FAM184AQ8NB25 1140 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 C3orf58Q8NDZ4 430 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 ITFG1Q8TB96 612 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 SNX29Q8TEQ0 813 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 DDX27Q96GQ7 796 aaKnown RBP23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 CDT1Q9H211 546 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 TMEM134Q9H6X4 195 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 GOLGA2P5Q9HBQ8 144 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 CDY1Q9Y6F8 540 aa23.83■■□□□ 1.41
SMARCC2-210ENST00000550519 PHLPP2Q6ZVD8 1323 aa23.83■■□□□ 1.4
SMARCC2-210ENST00000550519 TKTP29401 623 aaKnown RBP23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 PEX3P56589 373 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 SOX4Q06945 474 aaPredicted RBP23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 PTGDRQ13258 359 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 ANKS3Q6ZW76 656 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 MTSS1LQ765P7 747 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 TAS1R3Q7RTX0 852 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 RAB34Q9BZG1 259 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 SH2B1Q9NRF2 756 aaPredicted RBP23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 TOPORSQ9NS56 1045 aaPredicted RBP23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 ARHGAP28Q9P2N2 729 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 DNMT3BQ9UBC3 853 aaKnown RBP23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 KCNH3Q9ULD8 1083 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 PCDHB6Q9Y5E3 794 aa23.82■■□□□ 1.4
SMARCC2-210ENST00000550519 WDR87Q6ZQQ6 2873 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 CCDC169A6NNP5 214 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 E9PMD0 336 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 BRCC3P46736 316 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 SPECC1Q5M775 1068 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 SHDQ96IW2 340 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 CCDC94Q9BW85 323 aaPredicted RBP23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 SEMA4AQ9H3S1 761 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 HCFC1R1Q9NWW0 138 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 DNM3Q9UQ16 869 aa23.81■■□□□ 1.4
SMARCC2-210ENST00000550519 EP300Q09472 2414 aaPredicted RBP23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 I3L4J1 428 aa23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 HIP1RO75146 1068 aa23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 YARSP54577 528 aaKnown RBP23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 PABPC1LQ4VXU2 614 aaKnown RBP23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 NPAS3Q8IXF0 933 aa23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 PJA1Q8NG27 643 aa23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 ZMAT2Q96NC0 199 aaKnown RBP23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 KIF2CQ99661 725 aa23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 MRPL4Q9BYD3 311 aaKnown RBP23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 FOXQ1Q9C009 403 aa23.8■■□□□ 1.4
SMARCC2-210ENST00000550519 PP2D1A8MPX8 630 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 ABLIM1O14639 778 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 GLULP15104 373 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 PROZP22891 400 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 MAPK7Q13164 816 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 DMP1Q13316 513 aaPredicted RBP23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 IL17AQ16552 155 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 ZNF568Q3ZCX4 644 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 KRT79Q5XKE5 535 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 SLC8B1Q6J4K2 584 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 ZNF461Q8TAF7 563 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 DRC1Q96MC2 740 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 DDX23Q9BUQ8 820 aaKnown RBP23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 RUSC1Q9BVN2 902 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 TARS2Q9BW92 718 aaKnown RBP23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 SLC38A7Q9NVC3 462 aa23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 RBM19Q9Y4C8 960 aaKnown RBP23.79■■□□□ 1.4
SMARCC2-210ENST00000550519 ZNF292O60281 2723 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 LAD1O00515 517 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 MCF2P10911 925 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 KCNE1P15382 129 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 CDC25AP30304 524 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 PRPHP41219 470 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 OSTNP61366 133 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 SNW1Q13573 536 aaKnown RBP23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 RINT1Q6NUQ1 792 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 C1orf186Q6ZWK4 172 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 C1orf210Q8IVY1 113 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 MMTAG2Q9BU76 263 aaKnown RBP23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 C17orf75Q9HAS0 396 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 KMT5AQ9NQR1 393 aa23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 AVENQ9NQS1 362 aaPredicted RBP23.78■■□□□ 1.4
SMARCC2-210ENST00000550519 PODXLO00592 558 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 TBC1D4O60343 1298 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 ABLIM3O94929 683 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 LMNAP02545 664 aaKnown RBP23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 ROR1Q01973 937 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 PRKCQQ04759 706 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 SLC44A4Q53GD3 710 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 VARS2Q5ST30 1063 aaKnown RBP23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 KCNK18Q7Z418 384 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 ACAP3Q96P50 834 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 NTPCRQ9BSD7 190 aaKnown RBP23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 CNTN3Q9P232 1028 aa23.77■■□□□ 1.4
SMARCC2-210ENST00000550519 MRPS23Q9Y3D9 190 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms