RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 WDR78Q5VTH9 848 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 LVRNQ6Q4G3 990 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 MIGA2Q7L4E1 593 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 TTC7BQ86TV6 843 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 ZDHHC13Q8IUH4 622 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 PDZD8Q8NEN9 1154 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 CCT6BQ92526 530 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 AS3MTQ9HBK9 375 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 AGO4Q9HCK5 861 aaKnown RBP7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 HSPBP1Q9NZL4 362 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 ARHGAP28Q9P2N2 729 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 PADI4Q9UM07 663 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 SYNPO2Q9UMS6 1093 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 QSER1Q2KHR3 1735 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 ABCC6O95255 1503 aa7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 CENPJQ9HC77 1338 aaPredicted RBP7.35□□□□□ -1.23
TGFBR1-208ENST00000550253 SHANK3Q9BYB0 1731 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 A0A087WV62 115 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 PAPLNO95428 1278 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 DBHP09172 617 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 FSTP19883 344 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 GATA4P43694 442 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 HK3P52790 923 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 IRX6P78412 446 aaPredicted RBP7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 NKX6-1P78426 367 aaPredicted RBP7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 SLC15A2Q16348 729 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 ZNF827Q17R98 1081 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 LRSAM1Q6UWE0 723 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 MMS22LQ6ZRQ5 1243 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 ARHGEF25Q86VW2 580 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 CALML6Q8TD86 181 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 MISP3Q96FF7 219 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 PEX11GQ96HA9 241 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 ISCA1Q9BUE6 129 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 ARMT1Q9H993 441 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 FTSJ1Q9UET6 329 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 SWAP70Q9UH65 585 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 TNS2Q63HR2 1409 aa7.34□□□□□ -1.23
TGFBR1-208ENST00000550253 PSPNO60542 156 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 LRG1P02750 347 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 STT3AP46977 705 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 BNIP3Q12983 259 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 NOGQ13253 232 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 SIM2Q14190 667 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 FGL2Q14314 439 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 NR0B2Q15466 257 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 PRR16Q569H4 304 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 PPP4R3AQ6IN85 833 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 DRC7Q8IY82 874 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 IL31RAQ8NI17 732 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 DMRTA2Q96SC8 542 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 FDXACB1Q9BRP7 624 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 NOL10Q9BSC4 688 aaKnown RBP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 SLC39A2Q9NP94 309 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 INCENPQ9NQS7 918 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 RBM12Q9NTZ6 932 aaKnown RBP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 DTLQ9NZJ0 730 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 GPR52Q9Y2T5 361 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 SNX13Q9Y5W8 968 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 RGPD2P0DJD1 1756 aa7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-208ENST00000550253 ZC3H12DA2A288 527 aaKnown RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 FITM1A5D6W6 292 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 LRRC14BA6NHZ5 514 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 FOXN3O00409 490 aaPredicted RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 PHGDHO43175 533 aaKnown RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 SEC24DO94855 1032 aaPredicted RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 TSHRP16473 764 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 HOXA10P31260 410 aaPredicted RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 HK2P52789 917 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 SEPT2Q15019 361 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 CCDC157Q569K6 752 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 NLRX1Q86UT6 975 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 MYCT1Q8N699 235 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 BRI3BPQ8WY22 251 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 ZC3H10Q96K80 434 aaKnown RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 KIAA1586Q9HCI6 787 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 TNFRSF12AQ9NP84 129 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 TPSG1Q9NRR2 321 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 GALNT8Q9NY28 637 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 LY75O60449 1722 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 TTC21BQ7Z4L5 1316 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 CD163L1Q9NR16 1453 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 DOT1LQ8TEK3 1739 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 PRRT4C9JH25 899 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 SGTAO43765 313 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 FGF18O76093 207 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 RPLP2P05387 115 aaKnown RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 HSD3B1P14060 373 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 ZP2Q05996 745 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 HIBCHQ6NVY1 386 aaPredicted RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 PROSER1Q86XN7 944 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 RNF152Q8N8N0 203 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 HOXB13Q92826 284 aaPredicted RBP7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 MYLK2Q9H1R3 596 aa7.32□□□□□ -1.24
TGFBR1-208ENST00000550253 STK32BQ9NY57 414 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms