RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 PHLPP2Q6ZVD8 1323 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 K7ERI5 159 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 CCT6AP40227 531 aaKnown RBP14.92□□□□□ -0.02
TROAP-211ENST00000549891 CLCNKBP51801 687 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 GNL2Q13823 731 aaKnown RBP14.92□□□□□ -0.02
TROAP-211ENST00000549891 ZNF174Q15697 407 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 UPP1Q16831 310 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 ZNF528Q3MIS6 628 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 SLC44A4Q53GD3 710 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 GLRA4Q5JXX5 417 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 EEF1DP3Q658K8 133 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 ITFG1Q8TB96 612 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 RUBCNQ92622 972 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
TROAP-211ENST00000549891 DDX23Q9BUQ8 820 aaKnown RBP14.92□□□□□ -0.02
TROAP-211ENST00000549891 CCDC94Q9BW85 323 aaPredicted RBP14.92□□□□□ -0.02
TROAP-211ENST00000549891 CXCL16Q9H2A7 254 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 SLC38A7Q9NVC3 462 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 GDE1Q9NZC3 331 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 FBXO4Q9UKT5 387 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 TNFSF13BQ9Y275 285 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 USP20Q9Y2K6 914 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 MRPS23Q9Y3D9 190 aaKnown RBP14.92□□□□□ -0.02
TROAP-211ENST00000549891 FRYLO94915 3013 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 DMXL1Q9Y485 3027 aa14.92□□□□□ -0.02
TROAP-211ENST00000549891 MYH11P35749 1972 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 NCAM2O15394 837 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 LAMTOR5O43504 91 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 KINO60870 393 aaKnown RBP14.91□□□□□ -0.02
TROAP-211ENST00000549891 GLULP15104 373 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 ELF1P32519 619 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 TRAPPC10P48553 1259 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
TROAP-211ENST00000549891 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 UBXN2BQ14CS0 331 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 TTC38Q5R3I4 469 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 NT5DC1Q5TFE4 455 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 NPAS3Q8IXF0 933 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 ZNF461Q8TAF7 563 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 NELL2Q99435 816 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 KXD1Q9BQD3 176 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 KIFC3Q9BVG8 833 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 RAB34Q9BZG1 259 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 SPATA6Q9NWH7 488 aaPredicted RBP14.91□□□□□ -0.02
TROAP-211ENST00000549891 HCFC1R1Q9NWW0 138 aa14.91□□□□□ -0.02
TROAP-211ENST00000549891 DNMT3BQ9UBC3 853 aaKnown RBP14.91□□□□□ -0.02
TROAP-211ENST00000549891 NOL7Q9UMY1 257 aaKnown RBP14.91□□□□□ -0.02
TROAP-211ENST00000549891 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 FAM170BA6NMN3 283 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 ECI2O75521 394 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 LRG1P02750 347 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 EDN1P05305 212 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 NEFLP07196 543 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 TKTP29401 623 aaKnown RBP14.9□□□□□ -0.02
TROAP-211ENST00000549891 GRM5P41594 1212 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 PDIA5Q14554 519 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 ZBTB41Q5SVQ8 909 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 SLC8B1Q6J4K2 584 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 KIAA2013Q8IYS2 634 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 LLPHQ9BRT6 129 aaKnown RBP14.9□□□□□ -0.02
TROAP-211ENST00000549891 AVENQ9NQS1 362 aaPredicted RBP14.9□□□□□ -0.02
TROAP-211ENST00000549891 LRWD1Q9UFC0 647 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 KIAA1024Q9UPX6 916 aa14.9□□□□□ -0.02
TROAP-211ENST00000549891 MRPS17Q9Y2R5 130 aaKnown RBP14.9□□□□□ -0.02
TROAP-211ENST00000549891 PDCD11Q14690 1871 aaKnown RBP14.9□□□□□ -0.02
TROAP-211ENST00000549891 ARHGEF37A1IGU5 675 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 CCDC169A6NNP5 214 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 H7C4K7 107 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 PRRG1O14668 218 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 SPTLC1O15269 473 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 LRRN2O75325 713 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 RHOP08100 348 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 PTPN2P17706 415 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 DMP1Q13316 513 aaPredicted RBP14.89□□□□□ -0.03
TROAP-211ENST00000549891 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 ING5Q8WYH8 240 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 MRPL4Q9BYD3 311 aaKnown RBP14.89□□□□□ -0.03
TROAP-211ENST00000549891 TMEM134Q9H6X4 195 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 GOLGA2P5Q9HBQ8 144 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 LTB4R2Q9NPC1 389 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 LIMCH1Q9UPQ0 1083 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 RBM19Q9Y4C8 960 aaKnown RBP14.89□□□□□ -0.03
TROAP-211ENST00000549891 PCDHGA2Q9Y5H1 932 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 OTOGLQ3ZCN5 2332 aa14.89□□□□□ -0.03
TROAP-211ENST00000549891 CACNA1AO00555 2505 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 PODXLO00592 558 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 ZNF197O14709 1029 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 SYN3O14994 580 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 ABLIM3O94929 683 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 ATF2P15336 505 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 BRCC3P46736 316 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 PEX3P56589 373 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 HMGN5P82970 282 aaKnown RBP14.88□□□□□ -0.03
TROAP-211ENST00000549891 ROR1Q01973 937 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 PUM1Q14671 1186 aaKnown RBP eCLIP14.88□□□□□ -0.03
TROAP-211ENST00000549891 XKR4Q5GH76 650 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 VARS2Q5ST30 1063 aaKnown RBP14.88□□□□□ -0.03
TROAP-211ENST00000549891 CD300LGQ6UXG3 332 aa14.88□□□□□ -0.03
TROAP-211ENST00000549891 ALKAL1Q6UXT8 129 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms