RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 HAPLN2Q9GZV7 340 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 NUCKS1Q9H1E3 243 aaKnown RBP7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 VPS16Q9H269 839 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 TMX1Q9H3N1 280 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 NXF3Q9H4D5 531 aaKnown RBP7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 RSAD1Q9HA92 442 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 IL23AQ9NPF7 189 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 INTS13Q9NVM9 706 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 SNTG2Q9NY99 539 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 TAB2Q9NYJ8 693 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 IMPACTQ9P2X3 320 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 FBXL5Q9UKA1 691 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 ITGA11Q9UKX5 1188 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 PCDHB7Q9Y5E2 793 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 ALPK3Q96L96 1907 aa7.73□□□□□ -1.17
CALCOCO1-215ENST00000549688 TRIM43BA6NCK2 446 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 LRRIQ3A6PVS8 624 aaPredicted RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 ENPP3O14638 875 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 PHACTR2O75167 634 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 THP07101 528 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TRIM21P19474 475 aaKnown RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TBXAS1P24557 533 aaPredicted RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 RPL9P32969 192 aaKnown RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TNFSF9P41273 254 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 ZNF75DP51815 510 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TFAMQ00059 246 aaKnown RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 CCDC173Q0VFZ6 552 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 GRIK3Q13003 919 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TRPC3Q13507 836 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 SGSM1Q2NKQ1 1148 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 SLC10A6Q3KNW5 377 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 ZACNQ401N2 412 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 FIGNQ5HY92 759 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 MIIPQ5JXC2 388 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 ALKAL1Q6UXT8 129 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 ENOSF1Q7L5Y1 443 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 DEFB128Q7Z7B8 93 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 PPFIBP1Q86W92 1011 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 CDR2LQ86X02 465 aaPredicted RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 DRC7Q8IY82 874 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 SMG8Q8ND04 991 aaKnown RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 ZNF397Q8NF99 534 aaPredicted RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 JAKMIP2Q96AA8 810 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TRIM43Q96BQ3 446 aaPredicted RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 FAM212AQ96EL1 285 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 DDX27Q96GQ7 796 aaKnown RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 APOL6Q9BWW8 343 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 IKZF4Q9H2S9 585 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 PDE11AQ9HCR9 933 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 PLCB1Q9NQ66 1216 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 GCNT4Q9P109 453 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 COQ4Q9Y3A0 265 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TTC3P53804 2025 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 SCN5AQ14524 2016 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 UMODL1Q5DID0 1318 aa7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 TDRD15B5MCY1 1934 aaKnown RBP7.72□□□□□ -1.17
CALCOCO1-215ENST00000549688 MKI67P46013 3256 aaKnown RBP7.71□□□□□ -1.17
CALCOCO1-215ENST00000549688 SMIM28A0A1B0GU29 152 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 ARL5CA6NH57 179 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 LACTBL1A8MY62 500 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 MGEA5O60502 916 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 CLSTN1O94985 981 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 ADCY5O95622 1261 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 FGBP02675 491 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 CCDC172P0C7W6 258 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 TRIM49P0CI25 452 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 TRIM49CP0CI26 452 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 CSF2RAP15509 400 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 HOXD11P31277 338 aaPredicted RBP7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 PIK3CAP42336 1068 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 GCLMP48507 274 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 GSDMDP57764 484 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 YWHAEP62258 255 aaKnown RBP7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 RBP5P82980 135 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 SYCP1Q15431 976 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 TSR1Q2NL82 804 aaKnown RBP7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 ZBTB41Q5SVQ8 909 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 JADE1Q6IE81 842 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 C15orf39Q6ZRI6 1047 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 SV2AQ7L0J3 742 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 TRAPPC11Q7Z392 1133 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 ZNF598Q86UK7 904 aaKnown RBP7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 CNGA4Q8IV77 575 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 VSTM4Q8IW00 320 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 LRRC43Q8N309 656 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 LRRC52Q8N7C0 313 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 CEP120Q8N960 986 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 RNF169Q8NCN4 708 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 NEK11Q8NG66 645 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 PHOSPHO2Q8TCD6 241 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 KIF12Q96FN5 646 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 NT5C1BQ96P26 610 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 FAM193BQ96PV7 902 aaPredicted RBP7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 TMEM117Q9H0C3 514 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 RAB20Q9NX57 234 aa7.71□□□□□ -1.18
CALCOCO1-215ENST00000549688 APEX2Q9UBZ4 518 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms