RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 INTUQ9ULD6 942 aa5.24□□□□□ -1.57
SNRPF-202ENST00000549580 SYNPO2Q9UMS6 1093 aa5.24□□□□□ -1.57
SNRPF-202ENST00000549580 ARHGAP6O43182 974 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 KCNQ1P51787 676 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 AK2P54819 239 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 NRG3P56975 720 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 IL10RAQ13651 578 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 DGKDQ16760 1214 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 ANO6Q4KMQ2 910 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 ZMAT1Q5H9K5 638 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 C10orf62Q5T681 223 aaPredicted RBP5.23□□□□□ -1.57
SNRPF-202ENST00000549580 DARS2Q6PI48 645 aaKnown RBP5.23□□□□□ -1.57
SNRPF-202ENST00000549580 NPNTQ6UXI9 565 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 DPP8Q6V1X1 898 aaPredicted RBP5.23□□□□□ -1.57
SNRPF-202ENST00000549580 CCDC149Q6ZUS6 474 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 BCL6BQ8N143 479 aaPredicted RBP5.23□□□□□ -1.57
SNRPF-202ENST00000549580 KRT78Q8N1N4 520 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 OR2I1PQ8NGU4 316 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 WDR48Q8TAF3 677 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 NSUN6Q8TEA1 469 aaKnown RBP5.23□□□□□ -1.57
SNRPF-202ENST00000549580 HOXB13Q92826 284 aaPredicted RBP5.23□□□□□ -1.57
SNRPF-202ENST00000549580 OSBPL6Q9BZF3 934 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 BHMT2Q9H2M3 363 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 CDC42EP3Q9UKI2 254 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 DAAM1Q9Y4D1 1078 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 PCDHB1Q9Y5F3 818 aa5.23□□□□□ -1.57
SNRPF-202ENST00000549580 A0A1W2PR48 441 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 FAM171A2A8MVW0 826 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 GOLIM4O00461 696 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 FOXN1O15353 648 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 SLC16A6O15403 523 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 CREB3O43889 395 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 TMEM127O75204 238 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 RPS6KA4O75676 772 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 ITGB6P18564 788 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 TM4SF4P48230 202 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 MRPS21P82921 87 aaKnown RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 SLC25A3Q00325 362 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 MEF2AQ02078 507 aaPredicted RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 MAP3K12Q12852 859 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 DHX8Q14562 1220 aaKnown RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 KIAA0753Q2KHM9 967 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 GJC2Q5T442 439 aaPredicted RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 GPR156Q8NFN8 814 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 NTN5Q8WTR8 489 aaPredicted RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 RIN2Q8WYP3 895 aaPredicted RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 DYDC2Q96IM9 177 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 KMT5AQ9NQR1 393 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 POLR3BQ9NW08 1133 aaPredicted RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 PUF60Q9UHX1 559 aaKnown RBP5.22□□□□□ -1.57
SNRPF-202ENST00000549580 STXBP5LQ9Y2K9 1186 aa5.22□□□□□ -1.57
SNRPF-202ENST00000549580 CAPN8A6NHC0 703 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 SGTAO43765 313 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 RPS19P39019 145 aaKnown RBP5.21□□□□□ -1.58
SNRPF-202ENST00000549580 MAP2K6P52564 334 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 CACNB3P54284 484 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
SNRPF-202ENST00000549580 MGAT5Q09328 741 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 NFYCQ13952 458 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 GRM7Q14831 915 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 SEPT2Q15019 361 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 MAN2A1Q16706 1144 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 WDR72Q3MJ13 1102 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 C4orf46Q504U0 113 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 THEMIS2Q5TEJ8 643 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 RNF220Q5VTB9 566 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 TMEM200BQ69YZ2 307 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 GRAMD4Q6IC98 578 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 PPP4R3AQ6IN85 833 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 SWSAP1Q6NVH7 229 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 LMBR1LQ6UX01 489 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 MIGA2Q7L4E1 593 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 TTC7BQ86TV6 843 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 TMPRSS6Q8IU80 811 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNRPF-202ENST00000549580 KLHDC4Q8TBB5 520 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 PARD3BQ8TEW8 1205 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 KAT5Q92993 513 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 NKD2Q969F2 451 aaPredicted RBP5.21□□□□□ -1.58
SNRPF-202ENST00000549580 MYD88Q99836 296 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 AGO3Q9H9G7 860 aaKnown RBP5.21□□□□□ -1.58
SNRPF-202ENST00000549580 NLRC4Q9NPP4 1024 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.21□□□□□ -1.58
SNRPF-202ENST00000549580 FBXO10Q9UK96 956 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 RPTORQ8N122 1335 aa5.21□□□□□ -1.58
SNRPF-202ENST00000549580 A0A088AWK7 358 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 CAPN14A8MX76 684 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 PQBP1O60828 265 aaKnown RBP5.2□□□□□ -1.58
SNRPF-202ENST00000549580 LY86O95711 162 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 LTA4HP09960 611 aaKnown RBP5.2□□□□□ -1.58
SNRPF-202ENST00000549580 ZKSCAN1P17029 563 aaPredicted RBP5.2□□□□□ -1.58
SNRPF-202ENST00000549580 CTSSP25774 331 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 ETV4P43268 484 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 HK3P52790 923 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 GPSM2P81274 684 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 CD69Q07108 199 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 RRP1BQ14684 758 aaKnown RBP5.2□□□□□ -1.58
SNRPF-202ENST00000549580 NOMO1Q15155 1222 aa5.2□□□□□ -1.58
SNRPF-202ENST00000549580 CNN3Q15417 329 aaKnown RBP5.2□□□□□ -1.58
SNRPF-202ENST00000549580 C19orf54Q5BKX5 351 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms