RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 CUL5Q93034 780 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 ADAM28Q9UKQ2 775 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 PCOLCE2Q9UKZ9 415 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 INVSQ9Y283 1065 aa11.84□□□□□ -0.51
TROAP-209ENST00000549275 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
TROAP-209ENST00000549275 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.51
TROAP-209ENST00000549275 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 BACH1O14867 736 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 RNF40O75150 1001 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
TROAP-209ENST00000549275 UCNP55089 124 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 DMC1Q14565 340 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 SMAD1Q15797 465 aaKnown RBP11.83□□□□□ -0.52
TROAP-209ENST00000549275 PSMD5Q16401 504 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 ATG14Q6ZNE5 492 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 LEMD2Q8NC56 503 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 DAGLBQ8NCG7 672 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 ZSWIM3Q96MP5 696 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 ZNF302Q9NR11 478 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 HSPBP1Q9NZL4 362 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 MYH6P13533 1939 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
TROAP-209ENST00000549275 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 TRDMT1O14717 391 aaKnown RBP11.82□□□□□ -0.52
TROAP-209ENST00000549275 FOXP2O15409 715 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 LRG1P02750 347 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
TROAP-209ENST00000549275 FSTL4Q6MZW2 842 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 ABHD15Q6UXT9 468 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 ABCA7Q8IZY2 2146 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 CNNM3Q8NE01 707 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 TSTD1Q8NFU3 115 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 TTC9Q92623 222 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
TROAP-209ENST00000549275 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 SEC62Q99442 399 aaKnown RBP11.82□□□□□ -0.52
TROAP-209ENST00000549275 TOR4AQ9NXH8 423 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 NCANO14594 1321 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
TROAP-209ENST00000549275 PDCD11Q14690 1871 aaKnown RBP11.81□□□□□ -0.52
TROAP-209ENST00000549275 KLRF2D3W0D1 207 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 F8W810 466 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 TADA2AO75478 443 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 DRD1P21728 446 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 PTGER3P43115 390 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 ALX1Q15699 326 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 C2orf27AQ580R0 203 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.81□□□□□ -0.52
TROAP-209ENST00000549275 IQCA1Q86XH1 822 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 MARCH9Q86YJ5 346 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 SPACA7Q96KW9 195 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 CDC6Q99741 560 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 CORO1BQ9BR76 489 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 FBN3Q75N90 2809 aa11.81□□□□□ -0.52
TROAP-209ENST00000549275 THADAQ6YHU6 1953 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 ATP4AP20648 1035 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 TMPRSS3P57727 454 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 AMPD2Q01433 879 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 NBR1Q14596 966 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 ITPRIPL2Q3MIP1 535 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 C6orf118Q5T5N4 469 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 MIS18BP1Q6P0N0 1132 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 TMPRSS12Q86WS5 348 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 HOMER1Q86YM7 354 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 CCDC60Q8IWA6 550 aaPredicted RBP11.8□□□□□ -0.52
TROAP-209ENST00000549275 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 TTC8Q8TAM2 541 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 ESR2Q92731 530 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 FGF11Q92914 225 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 EXOC4Q96A65 974 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 ZNF668Q96K58 619 aaPredicted RBP11.8□□□□□ -0.52
TROAP-209ENST00000549275 TPSD1Q9BZJ3 242 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 FSCN3Q9NQT6 498 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 POLR3BQ9NW08 1133 aaPredicted RBP11.8□□□□□ -0.52
TROAP-209ENST00000549275 OBP2AQ9NY56 170 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 EVPLQ92817 2033 aa11.8□□□□□ -0.52
TROAP-209ENST00000549275 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
TROAP-209ENST00000549275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.79□□□□□ -0.52
TROAP-209ENST00000549275 PNMA6FA0A0J9YX94 578 aa11.79□□□□□ -0.52
TROAP-209ENST00000549275 FAM149AA5PLN7 773 aa11.79□□□□□ -0.52
TROAP-209ENST00000549275 ADAM12O43184 909 aa11.79□□□□□ -0.52
TROAP-209ENST00000549275 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
TROAP-209ENST00000549275 ELAVL4P26378 380 aaKnown RBP11.79□□□□□ -0.52
TROAP-209ENST00000549275 CCR2P41597 374 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms