RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
RAPGEF3-219ENST00000549151 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-219ENST00000549151 UVRAGQ9P2Y5 699 aa12.73□□□□□ -0.37
RAPGEF3-219ENST00000549151 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 SNX3O60493 162 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 MPP2Q14168 576 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 NEDD9Q14511 834 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 TAB3Q8N5C8 712 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 SNF8Q96H20 258 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 CEP170P1Q96L14 293 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 TRIM33Q9UPN9 1127 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 ATP6V1G2O95670 118 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 HARSP12081 509 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 MUTP22033 750 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 CAP2P40123 477 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 RPS6P62753 249 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 MYBPC2Q14324 1141 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 TMED2Q15363 201 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 KRT27Q7Z3Y8 459 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 PSPC1Q8WXF1 523 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 ECT2Q9H8V3 914 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 SPAG7O75391 227 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 DNAJC8O75937 253 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 CCNE2O96020 404 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 CFHP08603 1231 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 HSPA1LP34931 641 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 NSFP46459 744 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 ALCAMQ13740 583 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 CYP1B1Q16678 543 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 ACCSLQ4AC99 568 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 TRMT10CQ7L0Y3 403 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 PRCCQ92733 491 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 HAUS1Q96CS2 278 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 TMEM8AQ9HCN3 771 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 C1orf112Q9NSG2 853 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 FEM1BQ9UK73 627 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 EXOC7Q9UPT5 735 aa12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-219ENST00000549151 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 GHRP10912 638 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 CETPP11597 493 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 MTM1Q13496 603 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 ITIH4Q14624 930 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 CLEC16AQ2KHT3 1053 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 VSTM1Q6UX27 236 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 TMEM161BQ8NDZ6 487 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 MORC4Q8TE76 937 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 ACSF2Q96CM8 615 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 RMDN3Q96TC7 470 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 TELO2Q9Y4R8 837 aa12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-219ENST00000549151 A8MUI8 341 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 POC1B-GALNT4F8VUJ3 575 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 FSCN2O14926 492 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 TP73O15350 636 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 SUN1O94901 812 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 TTC4O95801 387 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 ICAM1P05362 532 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 ACOT2P49753 483 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 ATP13A4Q4VNC1 1196 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 P3H4Q92791 437 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 VTI1AQ96AJ9 217 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 KLHL29Q96CT2 875 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 STAMBPL1Q96FJ0 436 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 TACO1Q9BSH4 297 aaKnown RBP12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 GEMIN8Q9NWZ8 242 aaKnown RBP12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.38
RAPGEF3-219ENST00000549151 ZNF536O15090 1300 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 KRT10P13645 584 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 PSMC5P62195 406 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 MYO1EQ12965 1108 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 MCOLN2Q8IZK6 566 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 FAM151AQ8WW52 585 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 IWS1Q96ST2 819 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 GABBR1Q9UBS5 961 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 NRXN2Q9P2S2 1712 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 MTA2O94776 668 aa12.7□□□□□ -0.38
RAPGEF3-219ENST00000549151 APBA3O96018 575 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms