RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TMEM191BP0C7N4 346 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 ATF7P17544 494 aaPredicted RBP31.11■■■□□ 2.57
BRF1-213ENST00000548421 FAM189BP81408 668 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 TFAMQ00059 246 aaKnown RBP31.11■■■□□ 2.57
BRF1-213ENST00000548421 KCNMA1Q12791 1236 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 TCTN1Q2MV58 587 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 ZACNQ401N2 412 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 C7orf61Q8IZ16 206 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 LPPQ93052 612 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 PDLIM2Q96JY6 352 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 PCMTD1Q96MG8 357 aaPredicted RBP31.11■■■□□ 2.57
BRF1-213ENST00000548421 TSPAN18Q96SJ8 248 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 MTMR12Q9C0I1 747 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 KLK14Q9P0G3 267 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 GIT1Q9Y2X7 761 aa31.11■■■□□ 2.57
BRF1-213ENST00000548421 ENPP3O14638 875 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 TNNC2P02585 160 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 TDRD10Q5VZ19 366 aaKnown RBP31.1■■■□□ 2.57
BRF1-213ENST00000548421 AGMOQ6ZNB7 445 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 ZNF598Q86UK7 904 aaKnown RBP31.1■■■□□ 2.57
BRF1-213ENST00000548421 CACTINQ8WUQ7 758 aaKnown RBP31.1■■■□□ 2.57
BRF1-213ENST00000548421 KIF12Q96FN5 646 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 FAM84AQ96KN4 292 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 UBN1Q9NPG3 1134 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 COQ4Q9Y3A0 265 aa31.1■■■□□ 2.57
BRF1-213ENST00000548421 LTBP2Q14767 1821 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 MEIS3P2A8K0S8 358 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 EOMESO95936 686 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 CSF2RAP15509 400 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 CCDC173Q0VFZ6 552 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 BIRC3Q13489 604 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 EPC2Q52LR7 807 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 RNF169Q8NCN4 708 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 FBXL13Q8NEE6 735 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 VWCEQ96DN2 955 aa31.09■■■□□ 2.57
BRF1-213ENST00000548421 PFKMP08237 780 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 KCNE1P15382 129 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 IBSPP21815 317 aaPredicted RBP31.08■■■□□ 2.57
BRF1-213ENST00000548421 KLK7P49862 253 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 RPUSD2Q8IZ73 545 aaKnown RBP31.08■■■□□ 2.57
BRF1-213ENST00000548421 SPC24Q8NBT2 197 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 CXCL16Q9H2A7 254 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 RSAD1Q9HA92 442 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 PON1P27169 355 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 IKBKEQ14164 716 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 TRAPPC11Q7Z392 1133 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 TAS1R2Q8TE23 839 aa31.08■■■□□ 2.57
BRF1-213ENST00000548421 ZMAT2Q96NC0 199 aaKnown RBP31.08■■■□□ 2.57
BRF1-213ENST00000548421 LSM14BQ9BX40 385 aaKnown RBP31.08■■■□□ 2.57
BRF1-213ENST00000548421 ELAC1Q9H777 363 aaKnown RBP31.08■■■□□ 2.57
BRF1-213ENST00000548421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.08■■■□□ 2.57
BRF1-213ENST00000548421 TTC3P53804 2025 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 SMIM28A0A1B0GU29 152 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 SLC9A1P19634 815 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 MLH1P40692 756 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 GLRA4Q5JXX5 417 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 EHBP1Q8NDI1 1231 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 RPS6KC1Q96S38 1066 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 INTS2Q9H0H0 1204 aaKnown RBP31.07■■■□□ 2.56
BRF1-213ENST00000548421 RAB20Q9NX57 234 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 TMEM161AQ9NX61 479 aa31.07■■■□□ 2.56
BRF1-213ENST00000548421 EVI5O60447 810 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 PHACTR2O75167 634 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 PIK3CAP42336 1068 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 ZBTB6Q15916 424 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 TRIM65Q6PJ69 517 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 ZFP42Q96MM3 310 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 GAD1Q99259 594 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 PLCB1Q9NQ66 1216 aa31.06■■■□□ 2.56
BRF1-213ENST00000548421 FAM207AQ9NSI2 230 aaPredicted RBP31.06■■■□□ 2.56
BRF1-213ENST00000548421 TDRD15B5MCY1 1934 aaKnown RBP31.05■■■□□ 2.56
BRF1-213ENST00000548421 ARL5CA6NH57 179 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 XPOTO43592 962 aaKnown RBP31.05■■■□□ 2.56
BRF1-213ENST00000548421 TRIM21P19474 475 aaKnown RBP31.05■■■□□ 2.56
BRF1-213ENST00000548421 TRIM14Q14142 442 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 NEK11Q8NG66 645 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 LMO3Q8TAP4 145 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 PPP1R9BQ96SB3 815 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 NUP58Q9BVL2 599 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 RNF216Q9NWF9 866 aaPredicted RBP31.05■■■□□ 2.56
BRF1-213ENST00000548421 IMPACTQ9P2X3 320 aa31.05■■■□□ 2.56
BRF1-213ENST00000548421 UBQLN1Q9UMX0 589 aaKnown RBP31.05■■■□□ 2.56
BRF1-213ENST00000548421 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.04■■■□□ 2.56
BRF1-213ENST00000548421 PTGESO14684 152 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 VNN1O95497 513 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 HLA-DRAP01903 254 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 FIGNQ5HY92 759 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 C1orf127Q8N9H9 656 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 BEST2Q8NFU1 509 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 SEMA4DQ92854 862 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 IQCDQ96DY2 449 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 IL23AQ9NPF7 189 aa31.04■■■□□ 2.56
BRF1-213ENST00000548421 GOLGA6L6A8MZA4 724 aa31.03■■■□□ 2.56
BRF1-213ENST00000548421 TBX2Q13207 712 aaPredicted RBP31.03■■■□□ 2.56
BRF1-213ENST00000548421 PPIGQ13427 754 aaKnown RBP eCLIP31.03■■■□□ 2.566e-8■■□□□ 14.2
BRF1-213ENST00000548421 NCOA4Q13772 614 aa31.03■■■□□ 2.56
BRF1-213ENST00000548421 GSTCDQ8NEC7 633 aa31.03■■■□□ 2.56
BRF1-213ENST00000548421 DPP3Q9NY33 737 aa31.03■■■□□ 2.56
BRF1-213ENST00000548421 ITGA11Q9UKX5 1188 aa31.03■■■□□ 2.56
BRF1-213ENST00000548421 PCDHB7Q9Y5E2 793 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms