RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 ZSWIM2Q8NEG5 633 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 NOC3LQ8WTT2 800 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 DHTKD1Q96HY7 919 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 UROC1Q96N76 676 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 ZMAT2Q96NC0 199 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 TSG101Q99816 390 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 RBAKQ9NYW8 714 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 FAN1Q9Y2M0 1017 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 C2CD2Q9Y426 696 aa12.36□□□□□ -0.43
CALCOCO1-208ENST00000547988 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 NRP1O14786 923 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 EXOC3O60645 756 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 FGF18O76093 207 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 CYP3A5P20815 502 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 NR2F2P24468 414 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 PBX3P40426 434 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 OR1G1P47890 313 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 KRT17Q04695 432 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 LRRC63Q05C16 580 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 GPM6BQ13491 265 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 TMEM132DQ14C87 1099 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 SURF1Q15526 300 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 ZBTB6Q15916 424 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 FOXR2Q6PJQ5 311 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 Q7L0L9 218 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 GDPD5Q8WTR4 605 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 FAM161BQ96MY7 647 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 COLEC11Q9BWP8 271 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 LMAN2LQ9H0V9 348 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 PRDM12Q9H4Q4 367 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 MTMR10Q9NXD2 777 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 UBQLN1Q9UMX0 589 aaKnown RBP12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 PLXNA3P51805 1871 aa12.35□□□□□ -0.43
CALCOCO1-208ENST00000547988 MYO7AQ13402 2215 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 NT5C1B-RDH14C9J2C7 533 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 TMEM189-UBE2V1I3L0A0 370 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 MAPK13O15264 365 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 LPXNO60711 386 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 ITGB1P05556 798 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 CCNE1P24864 410 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 RPL9P32969 192 aaKnown RBP12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 SOX4Q06945 474 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 JADE1Q6IE81 842 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 GAS2L1Q99501 681 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 LMCD1Q9NZU5 365 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 PUF60Q9UHX1 559 aaKnown RBP12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 FRMD4BQ9Y2L6 1034 aa12.34□□□□□ -0.43
CALCOCO1-208ENST00000547988 GRM6O15303 877 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 NFICP08651 508 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 LRPAP1P30533 357 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 NLRP12P59046 1061 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 SPAG1Q07617 926 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 PAK1Q13153 545 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 ADAM9Q13443 819 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 PSMD6Q15008 389 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 PTPROQ16827 1216 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 UPP1Q16831 310 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 SPATA1Q5VX52 437 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 TMEM173Q86WV6 379 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 EFCAB13Q8IY85 973 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 SPPL3Q8TCT6 385 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 CACTINQ8WUQ7 758 aaKnown RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 NELFBQ8WX92 580 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 GUCD1Q96NT3 240 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 PAAF1Q9BRP4 392 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 GOLGA2P5Q9HBQ8 144 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 ALG13Q9NP73 1137 aaKnown RBP12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
CALCOCO1-208ENST00000547988 DACH1Q9UI36 760 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms