RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CRELD2Q6UXH1 353 aaPredicted RBP16.62■□□□□ 0.25
BRF1-212ENST00000547562 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 GRHL1Q9NZI5 618 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 PTPRJQ12913 1337 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 K7ERI5 159 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 EBAG9O00559 213 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 GBP1P32455 592 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 ARL2P36404 184 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 PIK3CAP42336 1068 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 BPIFB4P59827 614 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 SEPT14Q6ZU15 432 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 MCOLN2Q8IZK6 566 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
BRF1-212ENST00000547562 DEPTORQ8TB45 409 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 FBXO25Q8TCJ0 367 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 RUNDC3BQ96NL0 473 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 NIFKQ9BYG3 293 aaKnown RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 AVENQ9NQS1 362 aaPredicted RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 ANAPC7Q9UJX3 599 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 RARAP10276 462 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 MAPK4P31152 587 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 COILP38432 576 aaPredicted RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 RPL21P46778 160 aaKnown RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 ZBTB45Q96K62 511 aaPredicted RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 CEP89Q96ST8 783 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 EPN3Q9H201 632 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 RBAKQ9NYW8 714 aaPredicted RBP16.61■□□□□ 0.25
BRF1-212ENST00000547562 GPRC5DQ9NZD1 345 aa16.61■□□□□ 0.25
BRF1-212ENST00000547562 NDUFAB1O14561 156 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 TRIM66O15016 1216 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 VNN1O95497 513 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 MYBL1P10243 752 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
BRF1-212ENST00000547562 PMS2P54278 862 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 CCDC105Q8IYK2 499 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 C12orf50Q8NA57 414 aaPredicted RBP16.6■□□□□ 0.25
BRF1-212ENST00000547562 TRIM11Q96F44 468 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 PLVAPQ9BX97 442 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 EPB41L4BQ9H329 900 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 FEZ2Q9UHY8 353 aaPredicted RBP16.6■□□□□ 0.25
BRF1-212ENST00000547562 A0A0G2JMZ2 1700 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 FNTAP49354 379 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 PRKG1Q13976 671 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 PTGISQ16647 500 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 KRT71Q3SY84 523 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 SPOPLQ6IQ16 392 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 CPA5Q8WXQ8 436 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
BRF1-212ENST00000547562 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
BRF1-212ENST00000547562 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
BRF1-212ENST00000547562 PARP2Q9UGN5 583 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
BRF1-212ENST00000547562 MROH7Q68CQ1 1323 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 LDHAP00338 332 aaKnown RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 CYP1A1P04798 512 aaPredicted RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 RRM1P23921 792 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 CORO7P57737 925 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 CENPCQ03188 943 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 IFFO1Q0D2I5 559 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 C10orf67Q8IYJ2 551 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 MSTO1Q9BUK6 570 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 A0A0B4J269 797 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 SRRM3A6NNA2 597 aaPredicted RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 NUDT17P0C025 328 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 RFC5P40937 340 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 NSFP46459 744 aaKnown RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 ZBTB41Q5SVQ8 909 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 TRIM7Q9C029 511 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 LRRC19Q9H756 370 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 LRRC4CQ9HCJ2 640 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
BRF1-212ENST00000547562 NOVA2Q9UNW9 492 aaKnown RBP16.59■□□□□ 0.25
BRF1-212ENST00000547562 GSTTP1A0A1W2PQM5 241 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 FSCN2O14926 492 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 CLDN3O15551 220 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 PEX10O60683 326 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 USP2O75604 605 aaPredicted RBP16.58■□□□□ 0.25
BRF1-212ENST00000547562 FARP2O94887 1054 aaPredicted RBP16.58■□□□□ 0.25
BRF1-212ENST00000547562 CUL2Q13617 745 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 PCYT2Q99447 389 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 CGRRF1Q99675 332 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 TMEM134Q9H6X4 195 aa16.58■□□□□ 0.25
BRF1-212ENST00000547562 APOBEC3GQ9HC16 384 aaKnown RBP16.58■□□□□ 0.25
BRF1-212ENST00000547562 MTRF1LQ9UGC7 380 aaKnown RBP16.58■□□□□ 0.25
BRF1-212ENST00000547562 PTPN22Q9Y2R2 807 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms